Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1072 251 1e-64 seq21 132 9e-29 >seq1072 Length=1867 Score = 251 bits (278), Expect = 1e-64 Identities = 251/325 (77%), Gaps = 18/325 (6%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTG-GCGGGTCGCCGGCTTCTTA 78 || |||||||| | |||||||||||| | ||||| || | | || | ||||||| Sbjct 1019 GAACGAGACCTCAGCCTGCTAAATAGTCCTAGTTGCTTTTTGCAGCTAGCTGACTTCTTA 1078 Query 79 GAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137 |||||||||| ||| | || | |||||||| |||||||||||||||||||||||||||| Sbjct 1079 GAGGGACTATTGGCGTTTAGTCAATGGAAGTATGAGGCAATAACAGGTCTGTGATGCCCT 1138 Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGC 197 ||||||||||||||||||||||||||||||||| | |||| || | | ||||| | Sbjct 1139 TAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCATTCAACAAG--CCTATCCTTGAC 1196 Query 198 CGGAAGGT--------------CTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAG 243 || ||||| ||||| |||| | || | | ||||| | ||||| | Sbjct 1197 CGAAAGGTCCGGCCGGTACGGCCTGGGGAATCCGATGAACCCCCTTCGTGATTGGGATTG 1256 Query 244 AGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGC 303 ||| ||| || ||| |||| | |||||||||| || |||||||||| ||||| ||| ||| Sbjct 1257 AGCTTTGTAACTATCGCTCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGC 1316 Query 304 GTTGATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||||||| Sbjct 1317 GTTGATTACGTCCCTGCCCTTTGTA 1341 >seq21 Length=757752 Score = 132 bits (146), Expect = 9e-29 Identities = 203/271 (75%), Gaps = 25/271 (9%) Strand=Plus/Minus Query 71 GCTTCTTAGAGGGACTATCGGCT--CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 ||||||||||||||| || | | || || |||| ||||| |||||||||||||| Sbjct 129684 GCTTCTTAGAGGGACAGGCGCTTTTCCAGTCGCACGAAGATTGAG-CAATAACAGGTCTG 129626 Query 129 TGATGC-CCTTAGATGTTCTGGGCCGC--ACGCGCGCTACACTGACAGAGCCAACGAG-- 183 |||||| |||||||||| | ||||||| |||||||||||||||| | ||||| | Sbjct 129625 TGATGCACCTTAGATGTCCGGGGCCGCGAACGCGCGCTACACTGAAGGGATCAACGTGGC 129566 Query 184 -TTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATA 242 ||| | | |||||| ||||| ||||| ||| | |||| || ||||| | ||||| Sbjct 129565 TTTCCTTA-CTTGGC--GAAGGCCTGGG--ATCCGATGAAAC-CT-TCGTGATTGGGAT- 129514 Query 243 GAGCATTGCAATTATTGCTC-TTCAACGAGGAATGCCTAGT-AAGC--GCGTGTCATCAG 298 |||| ||| || ||| |||| | ||||||| | || ||| |||| || ||||| Sbjct 129513 GAGCTTTGTAACTATCGCTCATAGAACGAGGCAATCCCAGTAAAGCCGCCGAGTCAT--- 129457 Query 299 CACGCGTTGATTACGT-CCCTGCCCTTTGTA 328 ||||||||||||||| ||||||| || ||| Sbjct 129456 AACGCGTTGATTACGTCCCCTGCCTTTGGTA 129426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947186540288