Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq730 140 1e-30 seq796 120 1e-24 >seq730 Length=6546 Score = 140 bits (154), Expect = 1e-30 Identities = 381/530 (72%), Gaps = 50/530 (9%) Strand=Plus/Plus Query 33 TAGACCCGAAACCAAGTGATCTACCCATGGCCAG-GAT-GAAGGTGCGGTAACACGCCCT 90 ||||| |||||| | |||||||| ||||| | ||| |||| || | ||||| | | Sbjct 2003 TAGACGCGAAACGTTG-GATCTACC-ATGGCAGGTGATTGAAGCTGGGTAAACAC-CAGT 2059 Query 91 GGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAG 150 ||||| ||||||| | | ||||||| || |||||| || |||||||||||||||| Sbjct 2060 GGAGGACCGAACCGGTTGACGTTGAAAG-TTCTCGGATGACCT-TGGGTAGGGGTGAAAG 2117 Query 151 GCTAAACAAA--CTTGG-AAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGT--GCCT 205 || || |||| ||| | |||||||| || ||| || ||| |||||||| | || | Sbjct 2118 GCCAATCAAAAACTTCGTAAATAGCTCGTACTCCCCTAAATGCATTTAGGTGGCAGGCGT 2177 Query 206 CA-AGTATCACCATCGGGGGTAGA-GC-ACTGTTATGGCTAGGGGGTCATTGCGACTTAC 262 | ||| | || | || |||| || |||| || | | |||| | | | | ||| Sbjct 2178 GGTATTATTAT-ATAGAGGTTAGAAGCTACTG--ATTGATGCGGGG-CTTCACCGCCTAC 2233 Query 263 CAAACCAT--TG-CAAACTCCGAATGCGC-ATCAGTT--TTACCGCGGGAGTGAG-GGCA 315 | || | || ||||||| |||||| || || | || | | |||||| ||| Sbjct 2234 CCAATTTTCCTGACAAACTC-GAATGCTATATAAGGTGATTCCAAC---AGTGAGAGGCT 2289 Query 316 T-GGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCC-GGACTATCAGCTAAGGCCCCG 373 | |||||||||||||| || |||||||| |||||| || |||| |||||||| | ||| Sbjct 2290 TTGGGTGCTAAGGTCCATGTCCGAGAGG-GAAGAACCCAGGAC-ATCAGCTAGGTTCCCT 2347 Query 374 AAATGACAGCTAAGTTAAACTAACGAAGTCTGA-TTGCTAAG-ACA-GCTAGGATGTTGG 430 |||| | | ||| | ||| ||||| || || |||| || ||| ||||||||||||| Sbjct 2348 AAAT-ATATGTAATTGAAAG-AACGAGGTTTGTCTTGCCCAGGACAAGCTAGGATGTTGG 2405 Query 431 CTTGGAAG-CAGCCATTCATTT--AAAGAG-TGCGTAA-CAGCTCACTAGTCGAGGAGTC 485 ||||||| ||||||||||||| |||||| ||||||| ||||||| | |||||| | | Sbjct 2406 -TTGGAAGCCAGCCATTCATTTTAAAAGAGCTGCGTAATCAGCTCAAT-GTCGAGCGGAC 2463 Query 486 -GGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGAT 534 | || | ||| ||||||||| | |||| ||||||||| || ||| Sbjct 2464 AGAGCAT-GAT-ATAATCGGGCA-TAAGCATATTACCGAAGCTATGCGAT 2510 >seq796 Length=4978 Score = 120 bits (132), Expect = 1e-24 Identities = 137/171 (80%), Gaps = 16/171 (9%) Strand=Plus/Minus Query 124 GGGATGAGCTGTGGGT-AGGG-GTGAAAGGCTAA-ACAAACTTGGAAATAGCTGGTTCTC 180 ||||||| |||||| | |||| |||||||||||| |||||||| | |||||| ||||||| Sbjct 3305 GGGATGA-CTGTGGATTAGGGAGTGAAAGGCTAATACAAACTTCGGAATAGC-GGTTCTC 3248 Query 181 TCCGAAAA-CTATTTAGGTAGTGC---CTCAAGTATCACCATCGGGGGTAGAGCACTGT- 235 |||||||| |||||||||| ||| || | |||| ||||||||| ||||||| Sbjct 3247 TCCGAAAATCTATTTAGGTCATGCGTTCTAACGTATTT---TCGGGGGTACAGCACTGAC 3191 Query 236 TATGGCTAGGGGGTCATTGCGA--CTTACCAAACCATTGCAAACTCCGAAT 284 ||||| ||| |||||| ||| ||||||||||| | |||||||||||| Sbjct 3190 TATGGATAGAGGGTCAC-GCGTAGCTTACCAAACCTATTCAAACTCCGAAT 3141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689575990784