Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq730 217 5e-54 seq796 75.2 4e-11 >seq730 Length=6546 Score = 217 bits (240), Expect = 5e-54 Identities = 366/498 (73%), Gaps = 40/498 (8%) Strand=Plus/Minus Query 2 CGACTTGTAA-GTCTCGCA-GTCAA-GCTCCCTTGTGCACTTACA-CTC-ACCAC-CTGA 55 |||| |||| ||||| || ||||| |||||||| ||| || || ||| ||| | ||| Sbjct 3696 CGACCTGTACTGTCTCTCACGTCAAAGCTCCCTTATGCCATTGCAGCTCTACCGCACTG- 3638 Query 56 TTGCCAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACAT--TTTGGGAGGGCAACC 113 || || | | |||||||| ||||| | |||||||||| | ||||||||| | || Sbjct 3637 TTACCTAGCGTACTGAGGGA-CCTTTAGAAGCCTCCGTTATCTCTTTTGGGAGGCGACCC 3579 Query 114 GCCCCAGTTAAACTACCCACCAGGCA-CTGTCCCCAACCCAGATCATGGGCCAAGGTTAG 172 ||||||| ||||||||||||| ||| ||||||| | | || || || | || Sbjct 3578 ACCCCAGTCAAACTACCCACCAAGCAACTGTCCCGATAC----TCGCGGTT--AGCTCAG 3525 Query 173 ATATCCACTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGC 232 ||| || || || |||||||||||| ||||||| ||| || ||| ||||| Sbjct 3524 ATAAACAA-------AGGGTTGTATTTCAACAATGACTCCA-AACGCCTGGCGACGCCGC 3473 Query 233 ATCATAGTC-TCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGT 291 |||||| ||| |||||||| ||||| | | || | |||||| |||||||||| Sbjct 3472 TTCATAGAAGTCCAACCTATCCAACACATCATTTATCCAAGGTCAATACTAAGCTATAGT 3413 Query 292 GAAGGTCC-CGGGGTCTTTTCGTCCTGCCGCGCG-AAACGAGCATCTTTACTCGTACTGC 349 ||||| | | |||||||| ||||| | ||| | ||||| ||||||| || |||| | Sbjct 3412 AAAGGTGCACAGGGTCTTTCCGTCCA-CTGCGGGTAAACG-GCATCTTCACCGTTACTAC 3355 Query 350 AATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCG 409 |||| || || || ||| |||||||| || ||| |||||||||||||||| Sbjct 3354 AATT-CAACGAGCTCATGGCTGAGACAGTGTCCCAGACGTA---CCATTCGTGCAGGTCG 3299 Query 410 GAACTTACCCGACAAGGAA-TTTCGC-TACCTTAGGATGGTTA-TAGTTACCACCGCCGT 466 |||| |||||||||||||| |||||| ||||||| || |||| |||| || ||||||| Sbjct 3298 GAAC-TACCCGACAAGGAATTTTCGCTTACCTTA-GACCGTTACTAGTAACGGCCGCCGT 3241 Query 467 TTACT-GGGGCTTCAATT 483 ||||| |||||||||||| Sbjct 3240 TTACTGGGGGCTTCAATT 3223 >seq796 Length=4978 Score = 75.2 bits (82), Expect = 4e-11 Identities = 94/124 (76%), Gaps = 9/124 (7%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTT-GTGCACTTACACTC--ACCACCTGATT 57 ||||| ||| ||||||||||||||||||||| ||| |||||||| | || |||| Sbjct 1564 TCGACGTGTTTGTCTCGCAGTCAAGCTCCCTTAATGCGTTTACACTCCTTTCGCCGGATT 1623 Query 58 GCCAACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTT---GGGAGGGCAACCG 114 ||||| ||| || | ||| || |||||||||||||| ||| | |||| | |||| Sbjct 1624 TCCAAC--TGCTCAGAGGACC-TTCGGCGCCTCCGTTACTCTTTCTAGTGAGGCCGACCG 1680 Query 115 CCCC 118 |||| Sbjct 1681 CCCC 1684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702375808896