Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq979 73.4 6e-11 >seq979 Length=2555 Score = 73.4 bits (80), Expect = 6e-11 Identities = 90/121 (74%), Gaps = 3/121 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | | | ||||||||| | ||| | |||| || | | Sbjct 2353 GTACGAGAGGAACCGCCGGGTC--GGATAATTGGTAAT-GCGCTCGGCTGAAAAGCCGAT 2409 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| |||||| |||| || | | ||| ||||||||||||||||||||| | |||| | Sbjct 2410 GGCGCAAAGCTAACATCCGCAAGCTAATGACTGAACGCCTCTAAGTCAGAAGCTATGCTA 2469 Query 121 G 121 | Sbjct 2470 G 2470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819188722944