Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsibius_20dujardini_20[genbank_20GCA_5F002082055.1_202017-04-07] 1,421 sequences; 104,154,999 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq17 102 3e-16 seq156 96.9 1e-14 seq69 91.5 6e-13 >seq17 Length=826660 Score = 102 bits (112), Expect = 3e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 349071 TGGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGC 349130 |||| | || || ||||||| | |||| |||||||| | |||| ||| |||||||| Sbjct 721360 TGGCATTGATGATTTCCTTGATGCGCGGCACACCCAGGGTGATGTTCATGGACGCGACGC 721301 Query 349131 CGGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCG 349190 |||| || |||||||||| |||||||| ||||||| ||||||||||| | |||| | Sbjct 721300 CGGCGAAATGGAAGGTCTTGAGGGTCATCTGCGTGCCCGGCTCGCCGATACTCTGGGCGC 721241 Query 349191 CGAGGATGCCTACC 349204 |||| ||| ||| Sbjct 721240 AGAGGGCGCCGACC 721227 >seq156 Length=201976 Score = 96.9 bits (106), Expect = 1e-14 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 349071 TGGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGC 349130 || ||| || | |||||| || | |||| ||||| |||||||||||||||| || | Sbjct 24880 TGACGTTGATCAGCTCCTTCAGACGCGGCACACCCAGCGTCACGTTCTTGGCCGACACAC 24939 Query 349131 CGGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCG 349190 |||| |||||||||| | ||| |||| ||||||| ||||| ||||| | ||| | | Sbjct 24940 CGGCGTAGTGGAAGGTGTTGAGCGTCATCTGCGTGGCCGGCTCACCGATACTCTGCGCGG 24999 Query 349191 CGAGGATGCCTACCATCTCGCCGGGCGCGGC 349221 | || || ||||| || || |||||||| Sbjct 25000 CCAGCGCACCCACCATTTCACCCGGCGCGGC 25030 >seq69 Length=394671 Score = 91.5 bits (100), Expect = 6e-13 Identities = 118/162 (73%), Gaps = 12/162 (7%) Strand=Plus/Minus Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046 ||||| || |||| || ||||||||| ||||||||| | || ||||| | ||||||||| Sbjct 68389 CTCGATCATCATGCCGATGGTCATGCGAGACGGGTAGCCGTGGGGGTTGAAGATGATGTC 68330 Query 449047 GGGCGTCTCGCCGGCCGCGTTGAAGGGCATG---TCCTCGGGGTTGACCACCAGGCCGTT 449103 || || ||||| | | ||||||||||| ||| |||||| | |||| | | Sbjct 68329 TGGGATCATGCCGGACTCTGTGAAGGGCATGTCTTCCACGGGGTAG------AGGCGGCT 68276 Query 449104 ---GACGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCC 449142 ||| |||||||| ||||| || ||| |||||||| || Sbjct 68275 ACAGACACCCTTCTGTCCGTGACGACTGGCAAACTTGTCACC 68234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084700318310958