Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Intoshia_20linei_20[genbank_20GCA_5F001642005.1_202016-05-10]
3,520 sequences; 41,603,068 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq1 170 3e-40
seq2099 80.6 4e-13
>seq1
Length=3519
Score = 170 bits (188), Expect = 3e-40
Identities = 173/219 (79%), Gaps = 5/219 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||| |||||| ||||||||||||||| ||||||| |
Sbjct 430 GTACAAAGGGCAGGGACGTATTCAACACGAGCTA-ATGACTCGCGCTTACAAGGAATT-C 373
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAG-ATT 119
|||||| | | | | || || | | ||||||||||||| | || || || | |||
Sbjct 372 CTCGTTCATGTGCGT-AGTTACATCGCACAATCCCCATCACGAAGGAAGTTAAACGGATT 314
Query 120 ACCCGGACCTGTCGGCCAAGGTGA-TAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
| | ||| |||| || || | || || || ||| | | ||||||||||||||||||
Sbjct 313 TCTCATTCCTCTCGGAAAAAGTAAGTATACCCGATGACTCCTTCAGTGTAGCGCGCGTGC 254
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217
|||| | |||||||||||||||||||||||||||||||
Sbjct 253 AGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 215
>seq2099
Length=53888
Score = 80.6 bits (88), Expect = 4e-13
Identities = 59/66 (89%), Gaps = 2/66 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||| ||||| | ||||| ||||||||| ||||| |||
Sbjct 16287 GTACAAAGGGCAGGGACGTATTCAACACGAGC-TAATGACCCGCGCTTACAAGGAA-TTC 16344
Query 61 CTCGTT 66
||||||
Sbjct 16345 CTCGTT 16350
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751974356800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |