Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Intoshia_20linei_20[genbank_20GCA_5F001642005.1_202016-05-10] 3,520 sequences; 41,603,068 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1 136 6e-30 >seq1 Length=3519 Score = 136 bits (150), Expect = 6e-30 Identities = 81/85 (95%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 141 GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACC 200 ||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||| Sbjct 85 GCTATTTAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACC 26 Query 201 AACTAAGAACGGCCATGCACCACCA 225 ||||||||||||||||||||||||| Sbjct 25 AACTAAGAACGGCCATGCACCACCA 1 Score = 98.7 bits (108), Expect = 2e-18 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 ||| || || |||| |||||||||||||||||| |||| | ||||||||||||||||||| Sbjct 286 TACCCGATGACTCCTTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAG 227 Query 61 ACCTGTTATTGC 72 |||||||||||| Sbjct 226 ACCTGTTATTGC 215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796772829120