Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Intoshia_20linei_20[genbank_20GCA_5F001642005.1_202016-05-10] 3,520 sequences; 41,603,068 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 2e-13 >seq1 Length=3519 Score = 82.4 bits (90), Expect = 2e-13 Identities = 100/132 (76%), Gaps = 7/132 (5%) Strand=Plus/Minus Query 267 CATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCAC 326 |||||||||||| ||| ||| |||| | | || | | |||||| ||||||||||| Sbjct 1429 CATACGGTTTCACTTTCTGTTTAACTCTCTTTTCAAAG-TACTTTTCAACTTTCCCTCAC 1371 Query 327 GGTACTAGTTCACTATCGGTC---AGTCAGTAGTATTTAGCCTTGGAGGA--TGGTCCCC 381 |||||| |||| ||||||||| |||| | |||||||||||||| || | || | Sbjct 1370 GGTACTTGTTCGCTATCGGTCTCGTGTCAACA-TATTTAGCCTTGGATGAAGTCTACCAC 1312 Query 382 CCATATTCAGAC 393 ||||||| |||| Sbjct 1311 CCATATTAAGAC 1300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241556295680