Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Intoshia_20linei_20[genbank_20GCA_5F001642005.1_202016-05-10] 3,520 sequences; 41,603,068 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 5e-14 seq2099 77.0 2e-12 >seq1 Length=3519 Score = 82.4 bits (90), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||||| || || |||||| ||||||||||| |||||||||||||||||||| Sbjct 470 CTCACTAAACCATT-CAATCAGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 413 Query 109 TAATACAACGCAAGCT 124 | || |||| | |||| Sbjct 412 T-ATTCAACACGAGCT 398 >seq2099 Length=53888 Score = 77.0 bits (84), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||| ||| ||||| || || |||||| ||||||||||| |||||||||||||||||||| Sbjct 16247 CTCATTAAACCATT-CAATCAGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 16304 Query 109 TAATACAACGCAAGCT 124 | || |||| | |||| Sbjct 16305 T-ATTCAACACGAGCT 16319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300790073600