Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Intoshia_20linei_20[genbank_20GCA_5F001642005.1_202016-05-10] 3,520 sequences; 41,603,068 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq3331 87.8 2e-15 >seq3331 Length=2277 Score = 87.8 bits (96), Expect = 2e-15 Identities = 128/176 (73%), Gaps = 5/176 (3%) Strand=Plus/Plus Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTT--TGCTCGAATACATTACCAT 69 ||||||||||||||||| |||| | |||||||||||| | ||| ||||| ||| Sbjct 1821 TTTTACTTTGAAAAAATGAGAGTGCTCAAAGCAGGCCGTAGTGCCAGAATATTGATGCAT 1880 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 |||||||| ||||||||| | ||||||| | ||| ||| | | || ||||||| Sbjct 1881 GGAATAATGGAATAGGACCT-CGGTTCT-GTCTGTTGGTGATGAATAACG-AGGTAATGA 1937 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 | || | ||| || |||||| | ||||| | | | ||||| |||||||||| Sbjct 1938 TTAAGAGGGACAGCCGGGGGCATTCGTATTGCAGCGCTAGAGGTGGAATTCTTGGA 1993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511982540800