Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Intoshia_20linei_20[genbank_20GCA_5F001642005.1_202016-05-10] 3,520 sequences; 41,603,068 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq3331 363 5e-98 >seq3331 Length=2277 Score = 363 bits (402), Expect = 5e-98 Identities = 366/476 (77%), Gaps = 15/476 (3%) Strand=Plus/Minus Query 44 ATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCT 103 |||||| ||||| ||||||||| ||| |||||| ||||||||||||||||| |||| Sbjct 1556 ATTTATCGTCACCACCTCCCCGATCTAGGAGTGGGTAGTTTGCGCGCCTGCTGCCCTCCT 1497 Query 104 TGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTAC 163 |||| || | ||| |||||||||||||||||||||||||||||||| |||| ||||||| Sbjct 1496 TGGAAGTAGGAGCAATTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCTCCGTTAC 1437 Query 164 CCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGA 223 ||||| |||||||||||||| || ||||||||||| ||||||||||||||| | |||| Sbjct 1436 CCGTTACAACCATGGTAGGCCAATACCCTACCATCGACAGTTGATAGGGCAGACACTTGA 1377 Query 224 ATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAG 283 | || | ||| |||| ||||||||| |||| | ||||| | || ||| ||| | | Sbjct 1376 AGGATCTGTCGTCGGCACAAGGCCATACGATCGGCAAAGTTGTCCAGAGTCATCAATGCG 1317 Query 284 CCCCGAAGG----------GCGTTGGTTTTTTATCTAATAAATACACCCCTTCCG-AAGT 332 || || || ||| | || |||||| || | | | || | | | | Sbjct 1316 AGATGACGGCAAGCCGCCACCGCTGGATATTGATCTAACAACTGCCCTCCCACAGTATAT 1257 Query 333 CGGGG----TTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGG 388 || || | | |||||| ||||||||||| || |||| |||||||| ||||| | Sbjct 1256 CGTGGAAGCTCGATTGCATGTGTTAGCTCTAGATTTGCCACAGTTATCCAACTAGTATTG 1197 Query 389 TACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTG 448 | ||| |||||| ||| |||||||||||||| |||||| |||||||||| | | Sbjct 1196 CAAAATCCAATAAATTATAGCTGATTTAATGAGCTATTCGCGGTTTCACTGTCAATTAAG 1137 Query 449 CTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1136 TTTGAACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 1081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510346833920