Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kudoa_20iwatai_20[genbank_20GCA_5F001407235.1_202015-10-22] 1,637 sequences; 31,177,209 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1358 96.9 6e-18 >seq1358 Length=2832 Score = 96.9 bits (106), Expect = 6e-18 Identities = 165/235 (70%), Gaps = 12/235 (5%) Strand=Plus/Plus Query 80 TTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAAT-AAT 138 ||||| ||| | |||| |||||||||| | ||| |||| | |||||||||| ||| Sbjct 943 TTGAATAAAGCACAGTGCTCAAAGCAGGTGTAAGCTTGAATGTAATAGCATGGAACGAAT 1002 Query 139 AGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGG 198 | | | ||| | || | ||| | ||| ||| | || |||||| |||| Sbjct 1003 ATATT--GACCTTG---TCAAGGTTGGTTGTT-----GACAGTGGTCTCGATTAAAAGGG 1052 Query 199 ATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACT 258 | | | | ||| || |||| | | | || |||||||| ||| || || |||||| Sbjct 1053 ACATTTGAGGGCGTTAGTACTTGGTGGCGAGGGGTGAAATCCTTAGACCCATCAAAGACT 1112 Query 259 AACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 ||||| ||||||||| ||| ||||| ||||||||||||||| ||||||||||| Sbjct 1113 AACTAATGCGAAAGCATTCGCCAAGAGTGTTTTCATTAATCA-AGAACGAAAGTT 1166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915185018176