Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kudoa_20iwatai_20[genbank_20GCA_5F001407235.1_202015-10-22] 1,637 sequences; 31,177,209 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq150 161 4e-37 >seq150 Length=3958 Score = 161 bits (178), Expect = 4e-37 Identities = 213/288 (74%), Gaps = 18/288 (6%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT-GCGAGTGTTTGGGTGTCA 463 || ||||||||| |||||||||||||||| | | ||||| || ||| |||||| | Sbjct 968 CGACCCGTCTTGAAACACGGACCAAGGAGGCAGA-ATCTAGAGCAAGTTGGAGGGTGTAA 1026 Query 464 AACCCGTGCGCGTAATGAAAGTGAACG----GAGGTGGGAACCCGTGAGGGT---GCACC 516 |||||| ||||| |||||| | | || | ||| | ||| ||| | Sbjct 1027 AACCCGACGGCGTAGTGAAAGCAATAGATGAGATCTACTAACTTTGGTTGGTAGCGCATC 1086 Query 517 ATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA-TAGCTGTTGGGACCCG 575 |||| || || | || | |||| |||| ||||| ||| || ||| ||||| Sbjct 1087 ATCGGCCAGTCATTATACAAT------GATT-GAGTTAGAGCTCTAGGTGCTGG-ACCCG 1138 Query 576 AAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGC 635 |||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||| Sbjct 1139 AAAGATGGTGAACTATGCGTGAGCAGGGTGAAGCCAGAGGAAACTCTGGTGGAAGCTCGA 1198 Query 636 AGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| ||||| |||||||||||||||| | ||| |||||||||||| Sbjct 1199 AGCGATTCTGACGTGCAAATCGATCGTTTGACTTGCGTATAGGGGCGA 1246 Score = 122 bits (134), Expect = 4e-25 Identities = 126/161 (78%), Gaps = 3/161 (2%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAA-TGGGAGGTAAATTTCTTCTAAAGCTAAA 98 |||||| ||||||||||| |||| | ||||| | || |||||| | | | || |||||| Sbjct 454 GAGTCGGGTTGTTTGGGACTGCAAC-CTAAAGTAGGTGGTAAACTCCACCCAAGGCTAAA 512 Query 99 TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 ||| | | || |||||||||| ||||||| |||| ||||| ||||||| ||| || | Sbjct 513 TATAGACACGAAACCGATAGCGAACAAGTACTGTGAGGGAAAGTTGAAAAGAACTCTGAA 572 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||||||| ||||| |||||||| | | | |||||||| Sbjct 573 AAGAGAGTT-AAAAGTACGTGAAACCGCTAACGGGGAAGCG 612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079964886350