Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kudoa_20iwatai_20[genbank_20GCA_5F001407235.1_202015-10-22] 1,637 sequences; 31,177,209 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1358 161 2e-37 >seq1358 Length=2832 Score = 161 bits (178), Expect = 2e-37 Identities = 186/245 (76%), Gaps = 13/245 (5%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 || |||||||| ||||| |||||||||||| |||||||||||||||||||||||||| | Sbjct 1642 CATTGTAGCGCACGTGCAGCCCAGAACATCGAAGGGCATCACAGACCTGTTATTGCCACG 1583 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCA-ACCATAGTCG 135 ||||| |||| | || | ||| || ||||| | || | | | ||| || Sbjct 1582 --CTTCCCCCGGCTTAACTCCGGTTGTCTCTTTAAGAT--CGGCTAATACATTATAACCG 1527 Query 136 --ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 || | ||| | || | ||||||| |||||| |||||| |||| |||| |||| Sbjct 1526 TAAT----CAATTAA--AGATCGTGGTCTCGCTCGTTACCGGAATAAACCTGACAGATCA 1473 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 |||||||||||||||||||||||||||||||| ||| | |||| |||||| || ||| | Sbjct 1472 CTCCACCAACTAAGAACGGCCATGCACCACCAATCATTGTATCATGAAAGATCTCTCAGT 1413 Query 254 CTGTC 258 ||||| Sbjct 1412 CTGTC 1408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796787363997