Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kudoa_20iwatai_20[genbank_20GCA_5F001407235.1_202015-10-22] 1,637 sequences; 31,177,209 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1358 203 6e-50 >seq1358 Length=2832 Score = 203 bits (224), Expect = 6e-50 Identities = 200/256 (78%), Gaps = 8/256 (3%) Strand=Plus/Plus Query 74 TCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132 ||||| || ||| | ||| | |||||| ||||| || ||||||||||||||||||| Sbjct 1548 TCTTAAAGAGACAACCGGAGTTAAGCCGGGGGAAGCGTG--GCAATAACAGGTCTGTGAT 1605 Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192 |||||| |||||||||||| ||||| |||||||| || ||| | ||| ||| ||| Sbjct 1606 GCCCTTCGATGTTCTGGGCTGCACGTGCGCTACAATGGCAGTGACAATAAGT-----ACC 1660 Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252 | ||| |||| ||| |||||| || | ||||| ||||| |||| |||| ||| | Sbjct 1661 TACTCCGAAAGGGGCGGGAAATCTTAAAAATCGCTGTCTTGCTGTGGATTGAGCCTTGTA 1720 Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312 || ||||||| | || ||||||| ||| ||||||||| ||||||||| || ||||| ||| Sbjct 1721 ATAATTGCTCATGAAAGAGGAATTCCTCGTAAGCGCGAGTCATCAGCTCGTGTTGAATAC 1780 Query 313 GTCCCTGCCCTTTGTA 328 ||| |||||||||||| Sbjct 1781 GTCTCTGCCCTTTGTA 1796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947184494336