Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kudoa_20iwatai_20[genbank_20GCA_5F001407235.1_202015-10-22] 1,637 sequences; 31,177,209 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq62 114 1e-20 >seq62 Length=56742 Score = 114 bits (126), Expect = 1e-20 Identities = 420/657 (64%), Gaps = 8/657 (1%) Strand=Plus/Minus Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052 ||||| || | ||| | | ||||| | ||||| ||||| |||| || | | Sbjct 51216 ACAAATTTTGAAAGAGATAACGATGCTAAATTGCACACAGCAGTCTCATCCTTTGATGAG 51157 Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112 || || | ||||| ||||||||||| || | || || | ||| | |||||| Sbjct 51156 TATTCAATTATTTCTGTGCACAGATTGCTAGACTTAATAACACCAAGATTTTTTTGATTG 51097 Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172 || || | ||| || ||||| ||||| | ||| || || || || |||| ||| | Sbjct 51096 CTTTTACTATTACAAGCATCTTTGTAAAGCATATAAGGTTGACCAGTTTCAATTTGAGCT 51037 Query 66173 TCAATGATGGCGTGCCAAAGA----GCGCGTGCCTTCACCGTACGTACCGCCCTACCTTT 66228 || | ||| ||| || | || | || ||| ||| |||||| | ||| Sbjct 51036 TCTAGTATGAAAAACCATAGTTTTTGAGCTTCAATTTGACGTTTGTATCGCCCTTCTTTT 50977 Query 66229 GCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGG 66288 | | | | |||| | || | ||| || |||||| | || || || | || Sbjct 50976 TCATACTTTATGTAC----AGTTCTTCAAACTTTTCACCGTAACAATCCGAAAGTCCAGG 50921 Query 66289 ACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAG 66348 || | || || ||||| || ||||| |||| |||||| || |||||| | Sbjct 50920 GCATTCATGAGGGCACATAAGTGACCAGATTCCATTACTTTCTACTCGTTTCATAAACAA 50861 Query 66349 ATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATT 66408 ||| |||||||| | ||| ||||| ||||| | || || |||||| | || ||| Sbjct 50860 ATCTGGTATCCATAAGGCATAGAAAAGATCCCTAGCACGAATATCCTCACTACCAGTATT 50801 Query 66409 TTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAA 66468 ||| || | || | || || | || |||||||||||||| || | || ||||| || Sbjct 50800 TTTTCGAAGATCTAAAAATTCTACTATATCGGCATGCCATGGCTCTAAATATATGGCAAA 50741 Query 66469 CGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACG 66528 ||||| ||| ||| ||||||||||| ||||| |||| ||||||| | || || Sbjct 50740 TGAGCCTGGACGCTTGTTTCCACCTTGGTCAACGTAACGAGAACAATTGTTGTAAACTCG 50681 Query 66529 CAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGC 66588 || | || || | || ||||| || ||||| || || | || | || | || Sbjct 50680 TAAAAGTGGAACAATTCCATTAGAATTACCATTCGTTCCTGCAATATATGTACCACAAGC 50621 Query 66589 CCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA 66645 || |||| |||| || || || | |||||||| || ||||| |||||| Sbjct 50620 TCGAATATTATGAATATGTAGTCCCACTCCACCGGCAAATTTGGAGATCATAGCACA 50564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397560068145680