Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24]
3,830 sequences; 425,494,968 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq402 122 2e-25
>seq402
Length=536460
Score = 122 bits (134), Expect = 2e-25
Identities = 234/336 (70%), Gaps = 8/336 (2%)
Strand=Plus/Minus
Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCT-GAACCCGCGCGCCTACAAGCGGTCGGAGC 59
|| |||||| ||||| ||||||||| | || ||| || |||||| ||| ||||
Sbjct 161382 TACCCCGAG-AGGGGAGTGAAATAGTCTCTTGAAATTATATGCATACAAGAAGTCAGAGC 161324
Query 60 -CGAGTGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA 118
| | | || |||| ||||||||||||||| |||| ||| ||||||| | || |
Sbjct 161323 ACCAAT-ATGGTGTGATGGCGTGCCTTTTGCAGCATGATCCTGCGAGTTATTT-TCTTAA 161266
Query 119 GCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG 178
|| | ||||| || || | ||| | || ||||||||| |||| || |||
Sbjct 161265 GCAAAGTTAAA--CTGAAGAAGTGG-AGCTGTAGCGAAAGCGAGTGTTAATAGCGCGTTT 161209
Query 179 AGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGT 238
|||| || ||||| ||||||| ||||| || ||| | ||||| ||||| | ||
Sbjct 161208 AGTTTAAGGAATTAGACCCGAAACCGTGTGAGCTTACCATGGTCAGGTCGAAGTAACAGT 161149
Query 239 AACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTA 298
||| || ||||||||||||||| || |||| |||| | |||||| | || |
Sbjct 161148 AACATGTTATGGAGGACCGAACCAGTGTCCGTTTTAAAGGGCTTGGATGAACTGTGGTAA 161089
Query 299 GGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334
| ||||||| || |||| ||| |||||||||| ||
Sbjct 161088 GTGGTGAAATGCTAATCGAACACGGAAATAGCTGGT 161053
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 972762741760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |