Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq402 149 2e-33 >seq402 Length=536460 Score = 149 bits (164), Expect = 2e-33 Identities = 225/317 (71%), Gaps = 6/317 (2%) Strand=Plus/Minus Query 24 CTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTG 83 |||||||||||||||||| |||||||||||||||| |||||||||| |||| | | || Sbjct 163094 CTAACTACGTGCCAGCAGTCGCGGTAATACGTAGGTGGCAAGCGTTATCCGGATTCATTG 163035 Query 84 GGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACCTG 143 || ||| || |||| || ||| | |||| || | ||| |||| ||||| Sbjct 163034 GGTGTATAGTATGCGTAGACGGAATTATAAGTCAAAAATTTAATAATAAGGCTCAACCTT 162975 Query 144 GGAATTGCATTTGTGA--CTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGT 201 || ||||| ||| || || ||| | ||| | | | ||||| || || Sbjct 162974 ---ATACCATTTTTGATACTATTTTTCTTGAGGATAGAAGATGTTGATAGAATTTCATGT 162918 Query 202 GTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGA 261 ||||| ||||||||||| || || || | ||| ||||| |||||||||| | | Sbjct 162917 GTAGCGGTGAAATGCGTGGAGATATGAAAGAATACCAAAGGCGAAGGCAATTAACATGTC 162858 Query 262 TAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 321 || |||||| | | ||| || ||| |||| |||||| ||||||||||||||| ||||| Sbjct 162857 TATTCCTGACGTTGAGGCATGAGAGCATGGGTAGCAAATAGGATTAGATACCCTAGTAGT 162798 Query 322 CCA-CGCCCTAAACGAT 337 ||| || |||||||| Sbjct 162797 CCATAGCTGTAAACGAT 162781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289550608320