Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq402 149 1e-33 >seq402 Length=536460 Score = 149 bits (164), Expect = 1e-33 Identities = 218/308 (71%), Gaps = 4/308 (1%) Strand=Plus/Minus Query 32 GCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGATTTCTAACCGG 91 |||||| ||| ||| || | || ||||||| | |||| |||| | ||||||| Sbjct 159738 GCCAGTTGTCAGTGAGACGATAGTGAAATACTACTCTTGTTAAATTGAAACTCTAACCTT 159679 Query 92 ACGACGTATAACCGTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCT 151 || |||| | | ||||||||||||| ||| |||||||||||||||||||||| Sbjct 159678 TAGA----TAACAATCAAAGGGACAGTGTCAGGTGGGTAGTTTGACTGGGGCGGTCGCCT 159623 Query 152 CCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACA 211 || ||| |||||||||| || ||| | ||| ||| ||| |||| ||| | | | Sbjct 159622 CCTAAAATGTAACGGAGGTGCTCAATGGTACTTTCAATATGGTCAGAAATCATATGTAGA 159563 Query 212 GTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCG 271 ||| |||| | || ||| ||||||| | || ||||| | |||| |||||||| | Sbjct 159562 GTGTAAAGATACAAAAGTGCTTGACTGTAAGACTAACAAGTTGAACAGGTACGAAAGTAG 159503 Query 272 GGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCC 331 | |||| ||||||||| ||| | | ||||||| ||||||||||| ||||| Sbjct 159502 GACTTAGTGATCCGGCAATGCATTGTCTTTTGCTTGTCGCTCAACGGATAAAAGTTACCC 159443 Query 332 TGGGGATA 339 ||||||| Sbjct 159442 CGGGGATA 159435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982362374080