Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq402 165 2e-38 >seq402 Length=536460 Score = 165 bits (182), Expect = 2e-38 Identities = 247/347 (71%), Gaps = 18/347 (5%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 ||||||||||| || |||||||| || |||||||||||| || |||||| |||| ||| Sbjct 163169 CTTTACAATCCTAAAACCTTCTT-CAATCACGCGGCATTG-CTTCATCAGGGTTTCCCCC 163226 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||| || ||||| ||||||||||||||||||||||||| |||| ||||| | |||| Sbjct 163227 ATTGTGAAAAATTCCTTACTGCTGCCTCCCGTAGGAGTCTGGGCCGTATCTCAATCCCAG 163286 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||||| |||||||| || || | ||| | |||||| || ||| | | Sbjct 163287 TGTGGTCGATCAACCTCTCAGTCCGACTATGTATCAATGACTTGGTAGGCTTTTATCCTA 163346 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 ||||||| ||||| | || | |||||| | |||| || | || || || | | | Sbjct 163347 CCAACTATCTAATACAACACATTCTCATCCAAAAGCGAAA----CAAACGTTCCTTTCAT 163402 Query 241 T-------CTCCCGT----AGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCC 289 | || || | || ||| ||||||||| |||||||| |||||| Sbjct 163403 TATTAAAACTTATGTTCTAATAACATATTCGGTATTAGTCACCGTTTCCAGTAATTATCC 163462 Query 290 CCCACTACCAGGCAGATT-CCTAGGCATTACTCACCCGTCCGCCGCT 335 || ||| || ||||| || | ||||||||||||| |||| || Sbjct 163463 CCAACTTAAGGGTAGATTAAATATGTATTACTCACCCGTTCGCCACT 163509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071958942400