Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24]
3,830 sequences; 425,494,968 total letters
Query= AAMG01001178.1
Length=367
Score E
Sequences producing significant alignments: (Bits) Value
seq402 165 2e-38
>seq402
Length=536460
Score = 165 bits (182), Expect = 2e-38
Identities = 247/347 (71%), Gaps = 18/347 (5%)
Strand=Plus/Plus
Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60
||||||||||| || |||||||| || |||||||||||| || |||||| |||| |||
Sbjct 163169 CTTTACAATCCTAAAACCTTCTT-CAATCACGCGGCATTG-CTTCATCAGGGTTTCCCCC 163226
Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120
||||| || ||||| ||||||||||||||||||||||||| |||| ||||| | ||||
Sbjct 163227 ATTGTGAAAAATTCCTTACTGCTGCCTCCCGTAGGAGTCTGGGCCGTATCTCAATCCCAG 163286
Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180
|||| ||||| |||||||| || || | ||| | |||||| || ||| | |
Sbjct 163287 TGTGGTCGATCAACCTCTCAGTCCGACTATGTATCAATGACTTGGTAGGCTTTTATCCTA 163346
Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240
||||||| ||||| | || | |||||| | |||| || | || || || | | |
Sbjct 163347 CCAACTATCTAATACAACACATTCTCATCCAAAAGCGAAA----CAAACGTTCCTTTCAT 163402
Query 241 T-------CTCCCGT----AGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCC 289
| || || | || ||| ||||||||| |||||||| ||||||
Sbjct 163403 TATTAAAACTTATGTTCTAATAACATATTCGGTATTAGTCACCGTTTCCAGTAATTATCC 163462
Query 290 CCCACTACCAGGCAGATT-CCTAGGCATTACTCACCCGTCCGCCGCT 335
|| ||| || ||||| || | ||||||||||||| |||| ||
Sbjct 163463 CCAACTTAAGGGTAGATTAAATATGTATTACTCACCCGTTCGCCACT 163509
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1071958942400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |