Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq402 210 8e-52 >seq402 Length=536460 Score = 210 bits (232), Expect = 8e-52 Identities = 329/466 (71%), Gaps = 15/466 (3%) Strand=Plus/Plus Query 102 ATCCAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGA 161 || ||| |||||||| || || |||| ||||||| |||||| |||||| || Sbjct 160991 ATTCAGCGCTCTACCGCCATCAAAGTACACTCGACGCTATTCCTAAAAATATTTCGAAGA 161050 Query 162 GAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAG 221 ||||||||||| | ||| |||| || ||||||| || |||||| |||||| | Sbjct 161051 GAACCAGCTATTTCCGTGTTCGATTAGCATTTCACCACTTACCACAGTTCATCCAAGCCC 161110 Query 222 TTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCAT 281 ||| ||| | |||||||||||||| | |||| |||| ||||| |||| Sbjct 161111 TTTAAAACGGACACTGGTTCGGTCCTCCATAACATGTTACTGTTACTTCGACCTGACCAT 161170 Query 282 GGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGC 341 || || |||| | ||||||||| || | ||| | |||| ||||| |||||| Sbjct 161171 GGTAAGCTCACACGGTTTCGGGTCTAATTCCTTAAACT-AAACGCGCTATTAACACTCGC 161229 Query 342 TTTCGCTACGGCTACCCCAC-ACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTC 400 ||||||||| ||| | | | | | ||||| | || | || |||||||||| || Sbjct 161230 TTTCGCTACAGCTCCACTTCTTCAGTTTAACTTTGCTTAAGAA-AATAACTCGCAGGATC 161288 Query 401 ATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTG 460 || || ||||||||||||| |||| ||| | || |||| ||| ||| Sbjct 161289 ATGCTGCAAAAGGCACGCCATCAC-----ACCATATTGG------TGCTCTGACTTCTTG 161337 Query 461 TAGGCACATGGTTTC-AGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCC 519 || ||| || |||| || ||||||||||||||| | ||||||||||||||||||||| Sbjct 161338 TATGCATATAATTTCAAGAGACTATTTCACTCCCCTCTCGGGGTACTTTTCACCTTTCCC 161397 Query 520 TCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTA 565 |||||||||| || | |||||||||| | |||||||||||||| Sbjct 161398 TCACGGTACTGGTTCACTATCGGTCATTGAATAGTATTTAGGCTTA 161443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817530385920