Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq402 208 2e-51 >seq402 Length=536460 Score = 208 bits (230), Expect = 2e-51 Identities = 284/380 (75%), Gaps = 16/380 (4%) Strand=Plus/Plus Query 45 GGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCC 104 |||||||||||||| | | ||||| ||| | ||||| |||| | | || || | Sbjct 161126 GGTTCGGTCCTCCA-TAACATGTTACTGTTACTT-CGACCTGACCATGGTA-AGCTCACA 161182 Query 105 CGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACG 164 |||||| |||||||| |||| |||| |||| ||| ||| ||||||||| |||||| Sbjct 161183 CGGTTT-CGGGTCTAATTCCTTAA-ACTAAACGCGCTATTAACACTCGCTTT-CGCTACA 161239 Query 165 CCTCCCCTA-TTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAA 223 |||| || ||| ||| | |||||| |||||||| |||| | ||| | ||||| Sbjct 161240 GCTCCACTTCTTCAGTTTAACTTTGCTTAAGAAAATAACTCGCAGGATCATGCTGCAAAA 161299 Query 224 GGTACGCAGTCACCCAACAAAGTGG-GCTCCCACTGCTTGTACGCATACGGTTTCAGGAT 282 || |||| |||| | || | ||| |||| ||| |||||| ||||| ||||| || Sbjct 161300 GGCACGCCATCACAC--CATATTGGTGCTCTGACTTCTTGTATGCATATAATTTCAAGAG 161357 Query 283 -CTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTA 341 |||||||||||||||||| ||||| |||||| |||||||||||||||||| |||||||| Sbjct 161358 ACTATTTCACTCCCCTCTC-GGGGTACTTTTCACCTTTCCCTCACGGTACTGGTTCACTA 161416 Query 342 TCGGTCAGTCAGTAGTATTTAGCCTT--GGAGGATGGTCCCCCCATATTCAGACAAAGTT 399 ||||||| | | |||||||||| ||| |||| | | || || |||| ||||| || Sbjct 161417 TCGGTCATTGAATAGTATTTAGGCTTACGGAG--TCTTTTCCGCAGATTCCGACAAGATT 161474 Query 400 TCTCGTGCTCCGTCCTACTC 419 | ||||| |||| ||||| Sbjct 161475 ACACGTGCCTCGTCGTACTC 161494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241552446720