Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24]
3,830 sequences; 425,494,968 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq402 208 2e-51
>seq402
Length=536460
Score = 208 bits (230), Expect = 2e-51
Identities = 284/380 (75%), Gaps = 16/380 (4%)
Strand=Plus/Plus
Query 45 GGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCC 104
|||||||||||||| | | ||||| ||| | ||||| |||| | | || || |
Sbjct 161126 GGTTCGGTCCTCCA-TAACATGTTACTGTTACTT-CGACCTGACCATGGTA-AGCTCACA 161182
Query 105 CGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACG 164
|||||| |||||||| |||| |||| |||| ||| ||| ||||||||| ||||||
Sbjct 161183 CGGTTT-CGGGTCTAATTCCTTAA-ACTAAACGCGCTATTAACACTCGCTTT-CGCTACA 161239
Query 165 CCTCCCCTA-TTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAA 223
|||| || ||| ||| | |||||| |||||||| |||| | ||| | |||||
Sbjct 161240 GCTCCACTTCTTCAGTTTAACTTTGCTTAAGAAAATAACTCGCAGGATCATGCTGCAAAA 161299
Query 224 GGTACGCAGTCACCCAACAAAGTGG-GCTCCCACTGCTTGTACGCATACGGTTTCAGGAT 282
|| |||| |||| | || | ||| |||| ||| |||||| ||||| ||||| ||
Sbjct 161300 GGCACGCCATCACAC--CATATTGGTGCTCTGACTTCTTGTATGCATATAATTTCAAGAG 161357
Query 283 -CTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTA 341
|||||||||||||||||| ||||| |||||| |||||||||||||||||| ||||||||
Sbjct 161358 ACTATTTCACTCCCCTCTC-GGGGTACTTTTCACCTTTCCCTCACGGTACTGGTTCACTA 161416
Query 342 TCGGTCAGTCAGTAGTATTTAGCCTT--GGAGGATGGTCCCCCCATATTCAGACAAAGTT 399
||||||| | | |||||||||| ||| |||| | | || || |||| ||||| ||
Sbjct 161417 TCGGTCATTGAATAGTATTTAGGCTTACGGAG--TCTTTTCCGCAGATTCCGACAAGATT 161474
Query 400 TCTCGTGCTCCGTCCTACTC 419
| ||||| |||| |||||
Sbjct 161475 ACACGTGCCTCGTCGTACTC 161494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241552446720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |