Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24]
3,830 sequences; 425,494,968 total letters
Query= AAMG01001752.1
Length=400
Score E
Sequences producing significant alignments: (Bits) Value
seq402 158 3e-36
>seq402
Length=536460
Score = 158 bits (174), Expect = 3e-36
Identities = 280/402 (70%), Gaps = 11/402 (3%)
Strand=Plus/Plus
Query 3 ACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCCT 62
|||||| || | | ||||| ||||||||||||| ||| || ||| ||| || ||
Sbjct 160492 ACTACGTCTTTAGACCTCGTGTTAGGACCCGACTAACCTTAGGAGGACGAACCTGGCCTA 160551
Query 63 GGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTGCA 122
||| |||| | |||| | |||||| |||| ||| || |||| | ||||||
Sbjct 160552 AGAAACCTTAATCATTCGGTGTGAAGGATTCTCACCT-TCAATCGTTACTTACTCCTGCA 160610
Query 123 TTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGACGC 182
|||||||| | | |||||| | || | || | ||||| || | ||||
Sbjct 160611 TTCTCACTTCTAACCACTCCAAC-CAATTTTACAATTAATCTTCAATGTTGTTAGAACGC 160669
Query 183 TCCCCTACCCA-----ACCACACAGGTTGCCACAGCTTCGGCGGATAACTTAAGCCCCGC 237
|| ||||| | | ||| ||| || || ||||| | ||||| ||||||
Sbjct 160670 TCTTCTACCACTTGTTATAAAACAAGTT--CATAGTTTCGGTACAATACTTA-GCCCCGT 160726
Query 238 TACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGA-TGG 296
|| || || ||| || |||||||| ||||||||||||||||||||| || || |||
Sbjct 160727 TATATCTTCAACGCAGATACACTTGACTGGTGAGCTATTACGCACTCTTTAAATGAGTGG 160786
Query 297 CTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCA 356
||||||| |||||||| ||| ||||||| | | ||||||| | ||| ||||| |||
Sbjct 160787 CTGCTTCTAAGCCAACATCCCAGTTGTCTGAGTATCTCCACAACTTTTTCCACTTAGTAT 160846
Query 357 CCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398
| || ||| ||||| ||||||||| ||| |||||||||||
Sbjct 160847 TGATTTTGGGACCTTAACTGATGATCAGGGTTGTTTCCCTCT 160888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1177554897920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |