Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq402 158 3e-36 >seq402 Length=536460 Score = 158 bits (174), Expect = 3e-36 Identities = 280/402 (70%), Gaps = 11/402 (3%) Strand=Plus/Plus Query 3 ACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCCT 62 |||||| || | | ||||| ||||||||||||| ||| || ||| ||| || || Sbjct 160492 ACTACGTCTTTAGACCTCGTGTTAGGACCCGACTAACCTTAGGAGGACGAACCTGGCCTA 160551 Query 63 GGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTGCA 122 ||| |||| | |||| | |||||| |||| ||| || |||| | |||||| Sbjct 160552 AGAAACCTTAATCATTCGGTGTGAAGGATTCTCACCT-TCAATCGTTACTTACTCCTGCA 160610 Query 123 TTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGACGC 182 |||||||| | | |||||| | || | || | ||||| || | |||| Sbjct 160611 TTCTCACTTCTAACCACTCCAAC-CAATTTTACAATTAATCTTCAATGTTGTTAGAACGC 160669 Query 183 TCCCCTACCCA-----ACCACACAGGTTGCCACAGCTTCGGCGGATAACTTAAGCCCCGC 237 || ||||| | | ||| ||| || || ||||| | ||||| |||||| Sbjct 160670 TCTTCTACCACTTGTTATAAAACAAGTT--CATAGTTTCGGTACAATACTTA-GCCCCGT 160726 Query 238 TACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGA-TGG 296 || || || ||| || |||||||| ||||||||||||||||||||| || || ||| Sbjct 160727 TATATCTTCAACGCAGATACACTTGACTGGTGAGCTATTACGCACTCTTTAAATGAGTGG 160786 Query 297 CTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCA 356 ||||||| |||||||| ||| ||||||| | | ||||||| | ||| ||||| ||| Sbjct 160787 CTGCTTCTAAGCCAACATCCCAGTTGTCTGAGTATCTCCACAACTTTTTCCACTTAGTAT 160846 Query 357 CCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 | || ||| ||||| ||||||||| ||| ||||||||||| Sbjct 160847 TGATTTTGGGACCTTAACTGATGATCAGGGTTGTTTCCCTCT 160888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177554897920