Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq402 163 5e-38 >seq402 Length=536460 Score = 163 bits (180), Expect = 5e-38 Identities = 207/280 (74%), Gaps = 5/280 (2%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||| ||| || |||||| |||||| | | | | | ||||||||| |||| | Sbjct 162827 CCCATGCTCTCATGCCTCAACGTCAGGAATAGACATGTTAATTGCCTTCGCCTTTGGTAT 162886 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || | | ||| || |||||||||||||||||||| | ||||| | ||| | | Sbjct 162887 TCTTTCATATCTCCACGCATTTCACCGCTACACATGAAATTCTATCAACATCTTCTATCC 162946 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATG-GGTTGAGCCCATAGTTTTCACATCT-GA 178 |||||||||| ||| ||||| | | ||| ||||||||| || | || | | | || Sbjct 162947 TCAAGAAAAATAGTATCAAAA--ATGGTATAAGGTTGAGCCT-TATTATTAAATTTTTGA 163003 Query 179 CTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTA 238 ||| | ||| |||| | || |||||||||| |||||||||||||||||||||||| Sbjct 163004 CTTATAATTCCGTCTACGCATACTATACACCCAATGAATCCGGATAACGCTTGCCACCTA 163063 Query 239 CGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 |||||||||||| |||||||||||||||||| | || ||| Sbjct 163064 CGTATTACCGCGACTGCTGGCACGTAGTTAGTCATGACTT 163103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828769248930