Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq402 248 1e-63 >seq402 Length=536460 Score = 248 bits (274), Expect = 1e-63 Identities = 217/268 (81%), Gaps = 4/268 (1%) Strand=Plus/Plus Query 10 CTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCAC 69 ||||| |||||||||| |||||| ||||||| | | || ||||| |||||| |||| | Sbjct 159119 CTTCGTGCTTAGATGCTTTCAGCACTTATCCGATTTATACATAGCTACCCAGCGATGCTC 159178 Query 70 TTGGCAGTACAACTGGTGCACCAGAGGTTT--GTCCATCCCGGTCCTCTCGTACTAAGGA 127 ||||||| |||||||| |||||||||| | | || || | ||||||||||||| | Sbjct 159179 TTGGCAGAACAACTGGAACACCAGAGGTATAAGCCCTTCGC--TCCTCTCGTACTAGAAA 159236 Query 128 CAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTT 187 | ||||| |||||||||| ||| |||| | |||||||||| |||||||| |||||| Sbjct 159237 GACCTCCTATCAAATTTCCCACGTCCACAGCAGATAGGGACCAGACTGTCTCACGACGTC 159296 Query 188 CTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTC 247 ||||||||||| ||| || |||||||||||||||||||||||||||| |||| |||| Sbjct 159297 TTGAACCCAGCTAACGTCCCGTTTTAATGGGCGAACAGCCCAACCCTTGGAACCTGCTTC 159356 Query 248 AGCCCCAGGATGAGACGAGCCGACATCG 275 ||| ||||||| | | ||||||||||| Sbjct 159357 AGCTCCAGGATACGGCAAGCCGACATCG 159384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780771029880