Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq402 192 1e-46 >seq402 Length=536460 Score = 192 bits (212), Expect = 1e-46 Identities = 296/423 (70%), Gaps = 32/423 (8%) Strand=Plus/Plus Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63 |||||||| || || ||||||||| |||||||||| ||| ||||||| || | ||||| Sbjct 163169 CTTTACAATCCTAAAACCTTCTTCAATCACGCGGCATTGCTTCATCAGGGTTTCCCCCAT 163228 Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123 |||| || ||||| ||||||||||||||||||||||||| |||| ||||| | |||||| Sbjct 163229 TGTGAAAAATTCCTTACTGCTGCCTCCCGTAGGAGTCTGGGCCGTATCTCAATCCCAGTG 163288 Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183 ||| | ||| |||||||| || ||| | ||| | || ||| ||| ||| || || Sbjct 163289 TGGTCGATCAACCTCTCAGTCCGACTATGTATCAATGACTTGGTAGGCTTTTATCCTACC 163348 Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTG 243 ||||| ||||| | | |||||| | || || | | || || || || || Sbjct 163349 AACTATCTAATACAACACATTCTCATCCAAAAGCGAAA----CAAACGTTCCTTTCATTA 163404 Query 244 GT----CTTGCG-------ACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCC 292 | ||| | | ||| ||||||||| ||||||||||||| |||||||| Sbjct 163405 TTAAAACTTATGTTCTAATAACATATTCGGTATTAGTCACCGTTTCCAGTAATTATCCCC 163464 Query 293 CTCCATCAGGCAG-TTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGC 351 | || || || | ||||||||||||| ||||||| || ||| Sbjct 163465 AACTTAAGGGTAGATTAAATATGTATTACTCACCCGTTCGCCACT--------AAACAGT 163516 Query 352 AAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCT 411 || ||| || |||||||||||||||| |||||| ||||||||||||| | || Sbjct 163517 AAACTGTTT--------CGTTCGACTTGCATGTATTAGGCATGCCGCCAGCGTTAATCCT 163568 Query 412 GAG 414 ||| Sbjct 163569 GAG 163571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222353182080