Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq402 212 2e-52 >seq402 Length=536460 Score = 212 bits (234), Expect = 2e-52 Identities = 251/344 (73%), Gaps = 27/344 (8%) Strand=Plus/Minus Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227 ||||| ||||||||| | ||| || ||||||| | ||| ||| || |||||||| Sbjct 163359 ATTAGATAGTTGGTAGGATAAAAGCCTACCAAGTCATTGATACATAGTCGGACTGAGAGG 163300 Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGG 287 |||||| ||||| ||| | ||||| |||| ||| ||||||||||||||||||||| || Sbjct 163299 TTGATCGACCACACTGGGATTGAGATACGGCCCAGACTCCTACGGGAGGCAGCAGTAAGG 163240 Query 288 AATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTC 347 ||| || ||||||||| ||| ||||||| ||||| ||||||||| || ||||| || Sbjct 163239 AATTTTTCACAATGGGGGAAACCCTGATGAAGCAATGCCGCGTGATTGAAGAAGGTTTTA 163180 Query 348 GGGTCGTAAAGCTCTGTCCTCAAGGAAGA-----TAA---------------------TG 381 || | |||||| ||||| | |||||| | ||| || Sbjct 163179 GGATTGTAAAGATCTGTGGTAAAGGAAAAAAGTTTAAGTAGAGAAAAATACTTAAATTTG 163120 Query 382 ACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGG 441 | | ||||| | || ||| | | |||||||||||||||||| |||||||||||||||| Sbjct 163119 ATGTTACTTTACTAGAAAGTCATGACTAACTACGTGCCAGCAGTCGCGGTAATACGTAGG 163060 Query 442 GGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAG 485 ||| |||||||||||| ||| | ||| ||| || ||||||| Sbjct 163059 TGGCAAGCGTTATCCGG-ATTCATTGGGTGTATAGTATGCGTAG 163017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497542641920