Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq402 181 3e-43 >seq402 Length=536460 Score = 181 bits (200), Expect = 3e-43 Identities = 251/349 (72%), Gaps = 2/349 (1%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||||| | || ||| | | |||||||||||||||||| |||||||||||||||| ||| Sbjct 163115 TACTTTACTAGAAAGTCATGACTAACTACGTGCCAGCAGTCGCGGTAATACGTAGGTGGC 163056 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120 ||||||||||||| | | |||| ||| || ||||||| || | ||||||| | | Sbjct 163055 AAGCGTTATCCGGATTCATTGGGTGTATAGTATGCGTAGACGGAATTATAAGTCAAAAAT 162996 Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGG 180 || || ||||||||| || |||||| ||| || ||| || || Sbjct 162995 TTAATAATAAGGCTCAACCTTAT-ACCATTTTTGATACTATTTTTCTTGAGGATAGAAGA 162937 Query 181 GGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGG 240 | | ||||| | ||||||||||||||||||| || || | | ||| |||| || Sbjct 162936 TGTTGATAGAATTTCATGTGTAGCGGTGAAATGCGTGGAGATATGAAAGAATACCAAAGG 162877 Query 241 CGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAG 300 ||||||| | | | || | ||||| |||||| || ||| |||| |||||| || Sbjct 162876 CGAAGGCAATTAACATGTCTATTCCTGACGTTGAGGCATGAGAGCATGGGTAGCAAATAG 162817 Query 301 GATTAGATACCCTGGTAGTCCA-CGCCGTAAACGATGAATACTAGGTGT 348 ||||||||||||| |||||||| || ||||||||||| | |||| ||| Sbjct 162816 GATTAGATACCCTAGTAGTCCATAGCTGTAAACGATGAGTGCTAGATGT 162768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203153917440