Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq402 163 1e-37 >seq402 Length=536460 Score = 163 bits (180), Expect = 1e-37 Identities = 319/458 (70%), Gaps = 19/458 (4%) Strand=Plus/Minus Query 33 TAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGG 92 ||||||||||||| |||| || |||||| |||| |||| | |||||| | ||| Sbjct 161196 TAGACCCGAAACCGTGTGAGCTTACCATGGTCAGGTCGAAGTAACAGTAACATGTTATGG 161137 Query 93 AGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 152 ||| ||||||| ||| ||| |||||| |||||| || ||||||| || Sbjct 161136 AGGACCGAACCAGTGTCCGTTTTAAAGGGCTTGGATGAACTGTGGTAAGTGGTGAAATGC 161077 Query 153 TAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTAT 212 ||| | ||| |||||||||||||||||| ||||| | |||||| | || || ||| | Sbjct 161076 TAATCGAACACGGAAATAGCTGGTTCTCTTCGAAATATTTTTAGGAATAGCGTCGAGTGT 161017 Query 213 CACCATC--GGGGGTAGAGCACTGT-TATGGCTAGGGGGTCATTGCGAC--TTACCAAAC 267 || | || |||||||| ||| |||| | | ||| | | | | |||| || Sbjct 161016 -ACTTTGATGGCGGTAGAGCGCTGAATATGT-TGGAGGGCCCTCCCAAGGTTTACTTCAC 160959 Query 268 C--ATTGCAAACTCCGAATGCGCATCAGTT---TTACCGCGGGAGTGAGGGCATGGGTGC 322 ||| ||||| ||||| | ||||| | |||| ||| ||| || |||||| Sbjct 160958 GTAATT--AAACTTCGAATTC-CATCAAATAAATTACT-CGGCAGTCAGTCAGTGGGTGA 160903 Query 323 TAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAG 382 |||| ||| | | ||||| || || || || ||||| ||||| ||| |||| | Sbjct 160902 TAAG-TCCATTGGCAAGAGGGAAACAACCCTGATCATCAGTTAAGGTCCCAAAATCAATA 160844 Query 383 CTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGC 442 |||||| || || | || | || ||||| || |||||||||||| |||||||| Sbjct 160843 CTAAGTGGAA--AAAGTTGTGGAGATACTCAGACAACTGGGATGTTGGCTTAGAAGCAGC 160786 Query 443 CATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 || ||||||||||||||||||| ||||||| |||| || Sbjct 160785 CACTCATTTAAAGAGTGCGTAATAGCTCACCAGTCAAG 160748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689535288320