Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq402 105 1e-20 >seq402 Length=536460 Score = 105 bits (116), Expect = 1e-20 Identities = 176/249 (71%), Gaps = 8/249 (3%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGT-AGTAGCTTGCGAT 59 |||||| || ||||||||||||| | | || ||| ||| ||||| | || || ||||| Sbjct 161890 AGTGCATATAATGGATGCCTTGGCATTGAAAGACGAAGAAAGACGTGAATACCT-GCGAT 161832 Query 60 AAGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119 ||||| ||| || | ||| | |||||||||| |||| || ||||| |||||| | Sbjct 161831 AAGCTTCGGTTAGGTGGTAAAAAACCTTTGATCCGGAGATGTCTGAATGAGGAAACTCAC 161772 Query 120 C-CCTTTGGGTCATTGCATGCTGAA---TACATAGGTATGCAAAGCGAACGCGGCGAACT 175 | || || | | | || || | | ||| || | || ||| || ||||| Sbjct 161771 CACCATTAG--AGTGGTATCCTATATCTTTTTTAGATAAGGAAGTTAAACCTGGTGAACT 161714 Query 176 GAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGC 235 ||||||||| | || | ||||||||||| ||| ||||||| |||||| ||||||| Sbjct 161713 GAAACATCTTATTAACCAGAGGAAAAGAAAACAAAGTTGATTCCCTAAGTAGCGGCGAGC 161654 Query 236 GAAATGGGA 244 |||| |||| Sbjct 161653 GAAACGGGA 161645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918364825280