Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lingula_20anatina_20[refseq_20GCF_5F001039355.1_202015-06-24] 3,830 sequences; 425,494,968 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq402 233 7e-59 >seq402 Length=536460 Score = 233 bits (258), Expect = 7e-59 Identities = 343/481 (71%), Gaps = 7/481 (1%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 || |||||| ||||| ||||||||| | |||| |||||||| || ||||| | Sbjct 159519 TCAACTTGTTAGTCTTACAGTCAAGCACTTTTGTATCTTTACACTCTACATATGATTTCT 159578 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 |||| ||| | ||| ||| || ||||||||||||||| ||||| | |||||||||| Sbjct 159579 GACCATATTGAAAGTACCATTGAGCACCTCCGTTACATTTTAGGAGG-CGACCGCCCCAG 159637 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAA-GGTTAGATATCCA 179 | |||||||||||| | ||||||||| ||| | | || ||||||| | || Sbjct 159638 TCAAACTACCCACCTGACACTGTCCCTTT----GATTGTTATCTAAAGGTTAGAGTTTCA 159693 Query 180 CTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAG 239 | ||||| |||||||| | || ||| || ||| || | | ||||||| Sbjct 159694 ATTTAACAAGAGTAGTATTTCACTATCGTCTCACTGACAACTGGCATCATCAGATCATAG 159753 Query 240 TCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299 |||| || ||| || ||||| || || ||||| |||| |||||| ||| ||| Sbjct 159754 ACTCCTACTTATTCTGTACAAATTAAACTAAAACTCAATATCAAGTTATAGTAAAGCTCC 159813 Query 300 -CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358 ||||||||||||||| || ||| |||| ||||| | || ||| | |||||||| Sbjct 159814 ACGGGGTCTTTTCGTCTAGCTGCGGAAAACTCGCATCGTCACGAGTAATAAGATTTCACC 159873 Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACC 418 | | || ||||||||||| || || || |||||||||||| | ||||| | Sbjct 159874 GAGTCTACATTTGAGACAGCATCCAGATCATTGTACCTTTCGTGCAGGTCAGGACTTATC 159933 Query 419 CGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 ||||||||||||||||||||||||| |||||| |||| |||||||| | | |||||| Sbjct 159934 TGACAAGGAATTTCGCTACCTTAGGACCGTTATATTTACAGCCGCCGTTCATTAGGGCTT 159993 Query 479 C 479 | Sbjct 159994 C 159994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702334798080