Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lottia_20gigantea_20[refseq_20GCF_5F000327385.1_202012-12-20] 4,469 sequences; 359,505,668 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2153 116 3e-21 seq2942 91.5 1e-13 >seq2153 Length=2898250 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 61027 GAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGAT 61086 ||||| ||||| ||| ||||| | | | || ||| | ||||| || | ||||| ||| Sbjct 643710 GAACCATTATTGAGAGAAAATCCCCATAGATTTGTAATATTCCCTATTCAATATGATGAT 643651 Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| ||||||||||| || ||||| || || ||||| | || || || || ||| Sbjct 643650 ATCTGGCAAATGTACAAAAAAGCTGAAGCATCATTTTGGACTGCTGAAGAAGTTGACTTG 643591 Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAACAT 61206 || ||||| | | | | ||||| |||| | |||||||| |||||| |||| Sbjct 643590 TCTAAAGATTTAATTCATTGGGAAGCTTTAAAACCTGAAGAACAACACTTCATTTCACAT 643531 Query 61207 GTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTT 61253 || |||| |||||||| || || ||||| || ||||| ||||| Sbjct 643530 GTCCTGGCTTTCTTTGCTGCCAGTGATGGTATTGTGAATGAAAATTT 643484 >seq2942 Length=2007428 Score = 91.5 bits (100), Expect = 1e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 65152 CCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTCGGCCACATGCATATT 65211 ||| |||||||||||||| | |||||| ||||||| || || || | ||| ||||| Sbjct 1923529 CCATGCATAGAAATGCATGCTGGTTAATTTACCATAATTAGGTTCCGCAATATGAATATT 1923470 Query 65212 CAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 |||||||||||||||||| || ||| || ||||| || ||||| Sbjct 1923469 CAACGACTGACTCTGATCAATATAAGCTCCTCGATCGGCGGCCAT 1923425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397546346086160