Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lytechinus_20variegatus_20[genbank_20GCA_5F000239495.2_202015-03-11] 322,794 sequences; 1,061,195,396 total letters Query= AAMG01000026.1 Length=199 Score E Sequences producing significant alignments: (Bits) Value seq48931 132 5e-29 >seq48931 Length=594 Score = 132 bits (146), Expect = 5e-29 Identities = 149/198 (75%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 1 GCAGTCTTTAGATGAATGGCTGCTTCCAGGCCAACATCCTAACTGTCTTATCAATCAGAC 60 ||| |||||| ||||||||||||||||| |||||||||||| ||||| | || | || Sbjct 191 GCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCTAGCTGTCAAAGCAGTTCAAC 250 Query 61 TTCGTTAGATTGACTTATCTGACATTTCTGGGGCATATCTGAGAGTCCGGATTCTTCTCC 120 ||||| | ||||| | | |||| || | || |||| ||| || ||||| || Sbjct 251 CTCGTTTATTCAACTTAACATATATTTGGGGACCTTAGCTGATGGTCTGGGTTCTTTCCC 310 Query 121 TCTCGGGCACGGACCTTACCACCCATGCCCTCACTCGCGCGGCATGACTGATGCGCATTC 180 |||||| || |||||||| |||||||||||||||| || |||| | | |||||| Sbjct 311 TCTCGGACATGGACCTTAGCACCCATGCCCTCACT-GCTGTGCATCATTTTATAGCATTC 369 Query 181 GGAGTTTGGCAGGACTTG 198 |||||||| ||||| ||| Sbjct 370 GGAGTTTGTCAGGAATTG 387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535918888848