Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lytechinus_20variegatus_20[genbank_20GCA_5F000239495.2_202015-03-11] 322,794 sequences; 1,061,195,396 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq71608 340 2e-91 seq15485 237 2e-60 seq10961 125 7e-27 seq62962 122 9e-26 seq134406 109 6e-22 >seq71608 Length=1524 Score = 340 bits (376), Expect = 2e-91 Identities = 191/193 (99%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 1 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 577 TTACCTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAA 518 Query 61 GATAACTCGTCATCAGCTCCCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTAC 120 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 517 GATAACTCGTCATCAGCTCTCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTAC 458 Query 121 CACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 457 CACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 398 Query 181 TTAACCAGAAGTA 193 |||||||||||| Sbjct 397 ATAACCAGAAGTA 385 >seq15485 Length=396 Score = 237 bits (262), Expect = 2e-60 Identities = 163/184 (89%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 10 GCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAGATAACTCG 69 ||||||| ||||||| |||||||||||||||||||||||| | ||||||||| ||| Sbjct 396 GCTTAGAGGCTTTTCCTGGAAGCATGGCATCAACCACTTCTCCTTCTAAAAGAAGGATCG 337 Query 70 TCATCAGCTCCCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTACCACCTTAAA 129 ||||||| || |||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct 336 TCATCAGTTCTCGGCATTAAGATCCCGGATTTACCTAAGACCTCTGCCTACCACCTTAAA 277 Query 130 CTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCATTAACCAGA 189 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||| Sbjct 276 CTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCCCCATCGCAGTAACTAGA 217 Query 190 AGTA 193 |||| Sbjct 216 AGTA 213 >seq10961 Length=594 Score = 125 bits (138), Expect = 7e-27 Identities = 131/170 (77%), Gaps = 4/170 (2%) Strand=Plus/Minus Query 8 AAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAGATAACT 67 ||| ||||||||||||| |||||||| ||||||||| ||||| || | | || Sbjct 177 AAGTTTAGAAGCTTTTCCTGGAAGCAGGGCATCAACAACTTCACTCCCTT---GGGAGCT 121 Query 68 CGTCATCAGCTCCCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTACCACCTTA 127 |||| || || || | ||| | |||||||||||||| | | |||||| ||| Sbjct 120 CGTC-TCGTGTCTCGACTTTAAGAGTCCGGATTTACCTAAACTCTCGGCCTACACACTTT 62 Query 128 AACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATC 177 |||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct 61 CACTTGGACTACCAACGCCAAGCTTGCCTAGCCTTCTCCGTCCCTCCATC 12 >seq62962 Length=197 Score = 122 bits (134), Expect = 9e-26 Identities = 130/170 (76%), Gaps = 4/170 (2%) Strand=Plus/Minus Query 8 AAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAGATAACT 67 ||| ||||||||||||| |||||||| ||||||||| ||||| | | | || || Sbjct 177 AAGTTTAGAAGCTTTTCCTGGAAGCAGGGCATCAACAACTTCACTACCGTAG---TAGCT 121 Query 68 CGTCATCAGCTCCCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTACCACCTTA 127 |||| || || | || ||| |||||||||||||| | |||||| ||| Sbjct 120 CGTC-TCGCATCTCAGCTTTAAGCGTCCGGATTTACCTAAACACTCGGCCTACTTGCTTT 62 Query 128 AACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATC 177 ||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct 61 CACTTGGACAACCAACGCCAAGCTTGCTTAGCCTTCTCCGTCCCTCCATC 12 >seq134406 Length=645 Score = 109 bits (120), Expect = 6e-22 Identities = 133/176 (76%), Gaps = 14/176 (8%) Strand=Plus/Plus Query 8 AAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAGATAACT 67 ||| ||||| ||||||| |||||||| ||||||||| ||||||||| || | | ||| Sbjct 314 AAGTTTAGAGGCTTTTCCTGGAAGCAGGGCATCAACAACTTCGTCACCTT---GGTGACT 370 Query 68 CGTCATCAGCTCCCGGCCTTA----GAATCCCGGATTTACCTAAGATTC--CAGCCTACC 121 |||| || || | | | | ||| ||||||||||||| |||| | ||||| Sbjct 371 CGTC-TCGTGTCTCAGGTTAATGTTGAA--CCGGATTTACCTA--ATTCAACGCCCTACG 425 Query 122 ACCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATC 177 ||| ||||||| ||||||| ||||||| ||||||||||||||||||| || || Sbjct 426 CACTTTCACTTGGATAACCAACACCAAGCTTGCCTAGCCTTCTCCGTCCCCCCTTC 481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516778928532