Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lytechinus_20variegatus_20[genbank_20GCA_5F000239495.2_202015-03-11] 322,794 sequences; 1,061,195,396 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq71608 86.0 7e-15 seq122253 82.4 8e-14 seq134406 77.0 3e-12 seq10961 77.0 3e-12 >seq71608 Length=1524 Score = 86.0 bits (94), Expect = 7e-15 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || || |||| || |||| |||||||||||| ||| ||| ||| Sbjct 593 CAAACCGACACAGGTGGTTGGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAG 652 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 |||||||||||| || | | |||||||||||| || Sbjct 653 GAACTAGGCAAAATGGCACCGTAACTTCGGGAGAA 687 >seq122253 Length=872 Score = 82.4 bits (90), Expect = 8e-14 Identities = 125/179 (70%), Gaps = 7/179 (4%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || ||| ||| || ||||| |||||||||||| ||| | |||| Sbjct 838 AAACCGACACAGGTGGTCAGGTAGAGTATACCAAGGCGCTTGAGAGAAGTGTCCTGAAGG 779 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTAC-------CCAGAAAT 137 |||| |||||| || | | ||| |||||| | || | | |||| | || | | Sbjct 778 AACTCGGCAAATTGCCTCCGTACCTTCGGAAGAAGGAGGCCCTCATTGTGCGCAAGCATT 719 Query 138 GGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 ||||| ||| || ||| || |||||||| ||||||||||||||| ||| || Sbjct 718 TTGAGGGGGCACAGGCCAGGGGGTAGCGACTGTTTAGCAAAAACACAGGGCTCTGCTAA 660 >seq134406 Length=645 Score = 77.0 bits (84), Expect = 3e-12 Identities = 74/95 (78%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || ||| ||| || ||||||||||||||||| ||| ||| ||| Sbjct 292 CAAACCGACACAGGTGGTCAGGTAGAGAATACTAAGGCGCTTGAGAGAACTCGGGTGAAG 233 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 ||||| |||||| | | |||||||||||| || Sbjct 232 GAACTCGGCAAAATTGTACCGTAACTTCGGGAGAA 198 >seq10961 Length=594 Score = 77.0 bits (84), Expect = 3e-12 Identities = 74/95 (78%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || ||| ||| || ||||||||||||||||| ||| ||| ||| Sbjct 199 CAAACCGACACAGGTGGTCAGGTAGAGAATACTAAGGCGCTTGAGAGAACTCGGGTGAAG 258 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 ||||| |||||| | | |||||||||||| || Sbjct 259 GAACTCGGCAAAATTGTACCGTAACTTCGGGAGAA 293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529538902076