Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lytechinus_20variegatus_20[genbank_20GCA_5F000239495.2_202015-03-11]
322,794 sequences; 1,061,195,396 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq110105 515 1e-143
seq274740 509 5e-142
seq10615 152 2e-34
>seq110105
Length=1201
Score = 515 bits (570), Expect = 1e-143
Identities = 415/499 (83%), Gaps = 8/499 (2%)
Strand=Plus/Plus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
|||| |||||||||| ||||||||| |||||||||||| |||||||||||||||||||||
Sbjct 708 TACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 767
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120
|||||||||||||| |||||||||||||||||||| | ||||||||||| |
Sbjct 768 GTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTACTCTTGACATCCAGAAAATTTGG 827
Query 121 TAGAGATAGAGGTTTCC---CCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGT 177
|||||| | || |||||||| | | |||||||| ||||||| ||||||
Sbjct 828 CAGAGAT----GCCTCAGTGCCTTCGGGA-ATTCTGAGACAGGTGCTGCATGGCTGTCGT 882
Query 178 CAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGT 237
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 883 CAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCCTTAGT 942
Query 238 TGCCATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGG 297
||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 943 TGCCAGCATTTAGTTGGGCACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGGG 1002
Query 298 GACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAA 357
||||||||||| |||||||| |||||| | | |||||||||||||||||||||||
Sbjct 1003 GACGACGTCAAGTCATCATGGCCCTTACGTGTAGGGCTACACACGTGCTACAATGGTATG 1062
Query 358 TACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGA 417
|||| |||| ||||| || | || || ||| | ||| ||||| || ||| ||||
Sbjct 1063 TACAGAGGGAAGCGAGACAGTGATGTGGAGCGGACCCCTTAAAGCATATCGTAGTCCGGA 1122
Query 418 TTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGC 477
| | |||||||||||||||| ||||| ||||||||||||||||| || ||||||| |
Sbjct 1123 TCGGAGTCTGCAACTCGACTCCGTGAAGTCGGAATCGCTAGTAATCGCAGGTCAGCATAC 1182
Query 478 TACGGTGAATACGTTCCCG 496
| |||||||||||||||||
Sbjct 1183 TGCGGTGAATACGTTCCCG 1201
>seq274740
Length=1326
Score = 509 bits (564), Expect = 5e-142
Identities = 396/466 (85%), Gaps = 8/466 (2%)
Strand=Plus/Plus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
|||| |||||||||| ||||||||| |||||||||||| |||||||||||||||||||||
Sbjct 865 TACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 924
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120
|||||||||||||||||||||||||||||||||||| |||||||||| ||| | ||
Sbjct 925 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGCCTTGACATCCAATGAACTTTC 984
Query 121 TAGAGATAGA--GGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTC 178
|||||||||| ||| |||||||| ||| | |||||||| ||||||| |||||||
Sbjct 985 TAGAGATAGATTGGTG---CCTTCGGGA-ACATTGAGACAGGTGCTGCATGGCTGTCGTC 1040
Query 179 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTT 238
||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct 1041 AGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGTAACGAGCGCAACCCTTGTCCTTAGTT 1100
Query 239 GCCATCAT-TAA-GTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGG 296
||| || ||| | ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1101 ACCAGCACGTAATGGTGGGCACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGTGG 1160
Query 297 GGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACA 356
||| |||||||| |||||||| |||||| | |||||||||||||||||||||||| |
Sbjct 1161 GGATGACGTCAAGTCATCATGGCCCTTACGGCCTGGGCTACACACGTGCTACAATGGTCG 1220
Query 357 ATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGG 416
|||| |||| || || ||||||||| ||| ||||||| ||| | || ||| |||
Sbjct 1221 GTACAGAGGGTTGCCAAGCCGCGAGGTGGAGCTAATCCCAGAAAACCGATCGTAGTCCGG 1280
Query 417 ATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAAT 462
|| | |||||||||||||||| ||||| |||||||||||||||
Sbjct 1281 ATCGCAGTCTGCAACTCGACTGCGTGAAGTCGGAATCGCTAGTAAT 1326
>seq10615
Length=187
Score = 152 bits (168), Expect = 2e-34
Identities = 148/188 (79%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 297 GGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACA 356
||| ||||||||||||||| | |||||| | ||||||||||||||||||||||||
Sbjct 1 GGATGACGTCAAATCATCACGGCCCTTACGTCCTGGGCTACACACGTGCTACAATGGTAG 60
Query 357 ATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGG 416
|||| || ||||| | || ||| ||| |||| ||||| || ||||||||
Sbjct 61 GTACAGAGAGCAGCCACTGCGTGAGCAGGAGCGAATCT-ATAAAACCTATCACAGTTCGG 119
Query 417 ATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAG-CAT 475
|| | ||||||||||||||||| |||||||||||||||||||||||| | ||||| |||
Sbjct 120 ATCGGAGTCTGCAACTCGACTACGTGAAGCTGGAATCGCTAGTAATCGCATATCAGCCAT 179
Query 476 GCTACGGT 483
| | ||||
Sbjct 180 GATGCGGT 187
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1499145178240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |