Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lytechinus_20variegatus_20[genbank_20GCA_5F000239495.2_202015-03-11]
322,794 sequences; 1,061,195,396 total letters
Query= AAMG01001138.1
Length=202
Score E
Sequences producing significant alignments: (Bits) Value
seq71608 138 1e-30
seq122253 131 2e-28
seq10961 111 2e-22
>seq71608
Length=1524
Score = 138 bits (152), Expect = 1e-30
Identities = 121/152 (80%), Gaps = 2/152 (1%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| ||||| || | |||||||||| | | | |||||||||||
Sbjct 1050 CGGGGTCTTTCCGTCTAGCCGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTG 991
Query 83 AGCTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141
|| || ||| || |||||| ||| |||||||||||||||||||||||||
Sbjct 990 AG-TCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACC 932
Query 142 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||||
Sbjct 931 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 900
>seq122253
Length=872
Score = 131 bits (144), Expect = 2e-28
Identities = 117/151 (77%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
|||||||||| |||| | |||||| | | |||||||||| | | | ||||||| |||
Sbjct 401 CGGGGTCTTTCCGTCTAACCGCGGGAACCCCGCATCTTCACGGGGAATTCAATTTCGCTG 460
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
||| | ||||||| ||| ||||||||||||||||||||||||||
Sbjct 461 AGCATGTCCTGGAGACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 520
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||||||||
Sbjct 521 GACAAGGAATTTCGCTACCTTAGGACCGTTA 551
>seq10961
Length=594
Score = 111 bits (122), Expect = 2e-22
Identities = 61/61 (100%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 567 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 508
Query 173 A 173
|
Sbjct 507 A 507
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 545488869006
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |