Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lytechinus_20variegatus_20[genbank_20GCA_5F000239495.2_202015-03-11] 322,794 sequences; 1,061,195,396 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq205202 96.9 2e-18 seq6532 96.9 2e-18 >seq205202 Length=686 Score = 96.9 bits (106), Expect = 2e-18 Identities = 70/77 (91%), Gaps = 3/77 (4%) Strand=Plus/Plus Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||||| ||||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 128 TCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 185 Query 108 GTAATACAACGCAAGCT 124 ||||| |||||| |||| Sbjct 186 GTAAT-CAACGCGAGCT 201 >seq6532 Length=9725 Score = 96.9 bits (106), Expect = 2e-18 Identities = 70/77 (91%), Gaps = 3/77 (4%) Strand=Plus/Plus Query 48 TCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||||| ||||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 5217 TCTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 5274 Query 108 GTAATACAACGCAAGCT 124 ||||| |||||| |||| Sbjct 5275 GTAAT-CAACGCGAGCT 5290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299889720920