Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lytechinus_20variegatus_20[genbank_20GCA_5F000239495.2_202015-03-11] 322,794 sequences; 1,061,195,396 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq274740 203 6e-50 seq110105 199 8e-49 seq97994 104 5e-20 >seq274740 Length=1326 Score = 203 bits (224), Expect = 6e-50 Identities = 232/306 (76%), Gaps = 7/306 (2%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| |||| |||||||| |||||| ||||||||||||||||||||| Sbjct 375 GGCATGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 316 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||||||||||| ||| |||| | | ||| |||||||| || | ||| ||| Sbjct 315 GAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGAT 256 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| ||||||| || |||| | ||||||||| |||||| | | || ||||| | Sbjct 255 CGTCGCCTTGGTGAGCCATTACCCCACCAACTAGCTAATCCGACCTAGGCTCATCTGATA 196 Query 181 GCG-ATAAATCTTTGGTCAAAGAATGATGCCATCC-TCTGACATTATGCGGTATTAGCGT 238 ||| | | |||| || | | || | ||| |||||||||||||||| Sbjct 195 GCGCAAGGCCCGAAGGTC---CCCTGCTTTCTCCCGTAGGAC-GTATGCGGTATTAGCGT 140 Query 239 TCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCC 298 ||||||| |||||||| || | || |||||| || || | | |||||||||||||| Sbjct 139 CCGTTTCCGAACGTTATCCCCCACTACCAGGCAGATTCCT-AGGCATTACTCACCCGTCC 81 Query 299 GCCACT 304 ||| || Sbjct 80 GCCGCT 75 >seq110105 Length=1201 Score = 199 bits (220), Expect = 8e-49 Identities = 140/160 (88%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct 218 GGCATGGCTGCATCAGGGTTGCCCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 159 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | || |||||||| | |||| ||| Sbjct 158 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCTTCCTCTCAGAACAGCTAGAGAT 99 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATC 160 ||||| ||||||| || ||| ||||||||||| |||||| Sbjct 98 CGTCGCCTTGGTGAGCCTTTACCTCACCAACTAGCTAATC 59 >seq97994 Length=216 Score = 104 bits (114), Expect = 5e-20 Identities = 74/85 (87%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||||| | || |||||||| |||||| || |||||||||||||||||||||||| Sbjct 123 GCTGGTTCAGGCTCTCGCCCATTGTCCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCT 182 Query 67 GGGCCGTGTCTCAGTCCCAATGTGG 91 || |||||||||||| ||| ||||| Sbjct 183 GGTCCGTGTCTCAGTACCAGTGTGG 207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 995177224704