Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lytechinus_20variegatus_20[genbank_20GCA_5F000239495.2_202015-03-11]
322,794 sequences; 1,061,195,396 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq274740 221 2e-55
seq110105 217 2e-54
seq45914 205 2e-50
seq263711 158 2e-36
seq264214 132 8e-29
>seq274740
Length=1326
Score = 221 bits (244), Expect = 2e-55
Identities = 218/282 (77%), Gaps = 0/282 (0%)
Strand=Plus/Minus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
||||||||||||| |||||| |||||| | |||||| ||||||||||||||||||
Sbjct 749 CCCACGCTTTCGCACCTCAGTGTCAGTATCAGTCCAGGTGGTCGCCTTCGCCACTGGTGT 690
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|||| | ||||||||||||||||||||||||||| | |||||| ||||| | ||
Sbjct 689 TCCTTCCTATATCTACGCATTTCACCGCTACACAGGAAATTCCACCACCCTCTACCATAC 630
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180
|| || |||||| ||||||| |||||||||| | ||||||||| |||
Sbjct 629 TCTAGCTCGTCAGTTTTGAATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCCAACT 570
Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240
| | || ||||| ||| |||||| |||| ||| |||| |||||||||| ||| |
Sbjct 569 TAACGAACCACCTACGCGCGCTTTACGCCCAGTAATTCCGATTAACGCTTGCACCCTCTG 510
Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282
||||||||||||||||||||| ||||||||| ||||||||
Sbjct 509 TATTACCGCGGCTGCTGGCACAGAGTTAGCCGGTGCTTATTC 468
>seq110105
Length=1201
Score = 217 bits (240), Expect = 2e-54
Identities = 220/286 (77%), Gaps = 8/286 (3%)
Strand=Plus/Minus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
||||| ||||||| | | ||||||||| || |||| | |||||||||||||| |||
Sbjct 592 CCCACACTTTCGCACATGAGCGTCAGTCTTTGGCCAGGGAGTCGCCTTCGCCACTGATGT 533
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|||||| ||||||||||||||||||||||||| |||||||| | |||||||| ||
Sbjct 532 TCCTCCAGATATCTACGCATTTCACCGCTACACCTGGAATTCCACTCCCCTCTCCAAGAC 473
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTAT----GGGTTGAGCCCATAGTTTTCACATCT 176
|| || | |||||| |||| ||||| |||||||||| | ||||||||||
Sbjct 472 TCTAGTCATACAGTTCTAAAT----GCTATTCCCAGGTTGAGCCCGGGGCTTTCACATCT 417
Query 177 GACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACC 236
||| | |||||| | || |||||| |||| ||| |||| ||||||| || ||
Sbjct 416 AGCTTATATAACCGCCTGCGTGCGCTTTACGCCCAGTAATTCCGATTAACGCTCGCACCC 357
Query 237 TACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282
| |||||||||||||||||||||||| ||||||||| |||| |||
Sbjct 356 TCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTCTTC 311
>seq45914
Length=378
Score = 205 bits (226), Expect = 2e-50
Identities = 200/255 (78%), Gaps = 2/255 (1%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
||||||||||||| ||||||||||| | | |||||| | |||||||||||||||||||
Sbjct 125 CCCACGCTTTCGCACCTCAGCGTCAATACCAGTCCAGTGAGCCGCCTTCGCCACTGGTGT 184
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|| |||| ||||||||| |||||||| |||||| ||||||||| | ||||||| | |
Sbjct 185 TCTTCCGAATATCTACGAATTTCACCTCTACACTCGGAATTCCACTCACCTCTCCTGGAT 244
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGG-GTTGAGCCCATAGTTTTCACATCTGAC 179
||||| | |||| | ||| ||| | ||| ||||||| | | |||||| ||| ||
Sbjct 245 TCAAGCGATGCAGTCTTAAAGGCA-ATTCTGGAGTTGAGCTCCAGGCTTTCACCTCTAAC 303
Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239
|| | |||||||| || |||||| |||| ||| |||| |||||||| || ||| |
Sbjct 304 TTACAAAGCCGCCTACGTGCGCTTTACGCCCAGTAATTCCGAATAACGCTAGCTCCCTCC 363
Query 240 GTATTACCGCGGCTG 254
|||||||||||||||
Sbjct 364 GTATTACCGCGGCTG 378
>seq263711
Length=515
Score = 158 bits (174), Expect = 2e-36
Identities = 209/290 (72%), Gaps = 0/290 (0%)
Strand=Plus/Minus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
||| | | |||| || | |||||||||| | ||| | | | |||||||| | || ||
Sbjct 387 CCCGCACCTTCGAGCTTAAGCGTCAGTTGCGCTCCCGTCAGCTGCCTTCGCAATCGGAGT 328
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|| || ||||||| ||||||||||||||||| |||||||| | | | ||
Sbjct 327 TCTTCGTCATATCTAAGCATTTCACCGCTACACGACGAATTCCGCCAACGTTGTGCGTAC 268
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180
||||| ||| |||| | |||| | | ||||||| || ||||||| | |||
Sbjct 267 TCAAGGAAACCAGTATGCGCTGCAAGTCAGACGTTGAGCGTCTACATTTCACAACACACT 208
Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240
| ||| |||||| | ||||||| |||||||||||||||||||||| | | | ||
Sbjct 207 TAATCTCCGGCCTACGCTCCCTTTAAACCCAATAAATCCGGATAACGCCCGGACCTTCCG 148
Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|||||||||||||||||||||| | ||||||| ||||||| | ||||
Sbjct 147 TATTACCGCGGCTGCTGGCACGGAATTAGCCGGTCCTTATTCGTATGGTA 98
>seq264214
Length=216
Score = 132 bits (146), Expect = 8e-29
Identities = 142/185 (77%), Gaps = 2/185 (1%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
||||||||||||| ||||||||||| | |||||||| | ||||||||||||||||||
Sbjct 30 CCCACGCTTTCGCACCTCAGCGTCAATACCTGTCCAGTGAGTCGCCTTCGCCACTGGTGT 89
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|| ||| ||||||||| |||||||| |||||| |||||||| | ||||||||| |
Sbjct 90 TCTTCCTAATATCTACGAATTTCACCTCTACACTAGGAATTCCACTCACCTCTCCAGGAT 149
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCA-CATCTGAC 179
|| || | |||||| | |||| |||||||||| | ||||| | ||| ||
Sbjct 150 TCTAGCTTAGCAGTTTAGGAGGCAGTTCCGAGGTTGAGCCCCGGGATTTCACCCTCT-AC 208
Query 180 TTGCC 184
|||||
Sbjct 209 TTGCC 213
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 826208286974
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |