Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lytechinus_20variegatus_20[genbank_20GCA_5F000239495.2_202015-03-11] 322,794 sequences; 1,061,195,396 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq53099 185 2e-44 seq26321 152 9e-35 >seq53099 Length=925 Score = 185 bits (204), Expect = 2e-44 Identities = 199/261 (76%), Gaps = 18/261 (7%) Strand=Plus/Minus Query 69 GGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTT---- 124 ||||| ||||||| ||||||||||| |||| || |||||||| ||||| ||| | Sbjct 925 GGAGTCGGCAAACAGACTTTGATCCGGAGATGTCTGAATGGGGGAACCCAGCCATCATAA 866 Query 125 --TGGGT-CATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACA 181 ||| | | || || |||||||||||||| | ||||||| || ||||||||||| Sbjct 865 GATGGTTACCTTACA--CTGAATACATAGGTGTATGGAGCGAACCAGGGGAACTGAAACA 808 Query 182 TCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATG 241 |||||||| | |||||||||||||||||||||||||| |||||||||||||||| | Sbjct 807 TCTAAGTACCCTGAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGTGGCGAGCGAACGG 748 Query 242 GGATGAGCCTTTACGAGATAGTTGAATTGA---TAGTGGAATCCTCTGGAAATAGGAGCC 298 ||| |||| ||| ||| | |||| ||| |||| ||||||||| | ||| Sbjct 747 GGACTAGCCCTTA------AGTGGCTTTGAGATTAGCGGAACGCTCTGGAAAGTGCGGCC 694 Query 299 ATAGCGGGTGATAGCCCCGTA 319 |||| |||||||||||| ||| Sbjct 693 ATAGTGGGTGATAGCCCTGTA 673 >seq26321 Length=812 Score = 152 bits (168), Expect = 9e-35 Identities = 161/206 (78%), Gaps = 7/206 (3%) Strand=Plus/Plus Query 54 TGCGATAAGCTGCGGGGAGT-GAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGA 112 ||||| |||||| || |||| || |||| || ||| | || ||||| |||||||||||| Sbjct 4 TGCGAAAAGCTGTGGTGAGTTGACAAAACGCATTTT-AGCCACAGATGTCCGAATGGGGA 62 Query 113 AACCCGGCCCTTTGGGTCATTGCATGC---TGAATACATAGGTATGCA-AAGCGAACGCG 168 ||||| | | || || | ||| ||||||||||||| || | | || |||| | Sbjct 63 AACCCAGTGCATTTATGCACTATCTGCAACTGAATACATAGGT-TGTAGAGGCAAACGAG 121 Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228 | ||||||||||||||||||| | |||||||||||||||||||||||||| ||||| Sbjct 122 GGGAACTGAAACATCTAAGTACCCTTAGGAAAAGAAATCAACCGAGATTCCCCTAGTAGC 181 Query 229 GGCGAGCGAAATGGGATGAGCCTTTA 254 |||||||||| ||||| |||| ||| Sbjct 182 GGCGAGCGAACGGGGATTAGCCCTTA 207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915435459904