Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq4902 280 2e-73 seq2466 280 2e-73 seq1046 280 2e-73 seq890 280 2e-73 seq36771 196 8e-48 seq1389 78.8 1e-12 >seq4902 Length=494613 Score = 280 bits (310), Expect = 2e-73 Identities = 216/251 (86%), Gaps = 8/251 (3%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 479486 TCCTTCAGTGTAGCGCGCGTGCGGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTG 479545 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAAC-CAT 130 | |||| || | ||||| | |||| | |||||||||||||| |||| || || Sbjct 479546 C-TCAATCT-CGTGTGGCTAAACGCCACTTGTCCCTCTAAGAAGTTG--CACCGACGCAG 479601 Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 || ||| || |||||||||||| || ||||||||||||||||||||||||||||| Sbjct 479602 AGCGGATCGGTGAACTATTTAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGAC 479661 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 479662 AAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCT 479721 Query 248 ATCAATCTGTC 258 |||||||||| Sbjct 479722 CTCAATCTGTC 479732 >seq2466 Length=405557 Score = 280 bits (310), Expect = 2e-73 Identities = 216/251 (86%), Gaps = 8/251 (3%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 206136 TCCTTCAGTGTAGCGCGCGTGCGGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTG 206195 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAAC-CAT 130 | |||| || | ||||| | |||| | |||||||||||||| |||| || || Sbjct 206196 C-TCAATCT-CGTGTGGCTAAACGCCACTTGTCCCTCTAAGAAGTTG--CACCGACGCAG 206251 Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 || ||| || |||||||||||| || ||||||||||||||||||||||||||||| Sbjct 206252 AGCGGATCGGTGAACTATTTAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGAC 206311 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 206312 AAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCT 206371 Query 248 ATCAATCTGTC 258 |||||||||| Sbjct 206372 CTCAATCTGTC 206382 >seq1046 Length=1918858 Score = 280 bits (310), Expect = 2e-73 Identities = 216/251 (86%), Gaps = 8/251 (3%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 11665 TCCTTCAGTGTAGCGCGCGTGCGGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTG 11606 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAAC-CAT 130 | |||| || | ||||| | |||| | |||||||||||||| |||| || || Sbjct 11605 C-TCAATCT-CGTGTGGCTAAACGCCACTTGTCCCTCTAAGAAGTTG--CACCGACGCAG 11550 Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 || ||| || |||||||||||| || ||||||||||||||||||||||||||||| Sbjct 11549 AGCGGATCGGTGAACTATTTAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGAC 11490 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 11489 AAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCT 11430 Query 248 ATCAATCTGTC 258 |||||||||| Sbjct 11429 CTCAATCTGTC 11419 >seq890 Length=1148126 Score = 280 bits (310), Expect = 2e-73 Identities = 216/251 (86%), Gaps = 8/251 (3%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 877151 TCCTTCAGTGTAGCGCGCGTGCGGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTG 877210 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAAC-CAT 130 | |||| || | ||||| | |||| | |||||||||||||| |||| || || Sbjct 877211 C-TCAATCT-CGTGTGGCTAAACGCCACTTGTCCCTCTAAGAAGTTG--CACCGACGCAG 877266 Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 || ||| || |||||||||||| || ||||||||||||||||||||||||||||| Sbjct 877267 AGCGGATCGGTGAACTATTTAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGAC 877326 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 877327 AAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCT 877386 Query 248 ATCAATCTGTC 258 |||||||||| Sbjct 877387 CTCAATCTGTC 877397 >seq36771 Length=294 Score = 196 bits (216), Expect = 8e-48 Identities = 146/169 (86%), Gaps = 4/169 (2%) Strand=Plus/Minus Query 38 CAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCC 97 |||||||||||||||||||||||||||||||||||||||||||||||| | | || | Sbjct 168 CAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATAGATTAAAAATC 109 Query 98 AATAGTCCCTCTAAGAAGCCAGCCACCAACCATAG---TCGATGGGGCTATTTAGCAGGT 154 ||||||||||||||||| |||||| || | | ||| | ||||||||||||| Sbjct 108 TATAGTCCCTCTAAGAAGTTAGCCACGAATTAGAAAATTCGC-GTAACTATTTAGCAGGT 50 Query 155 TAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAAC 203 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 49 TAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAAC 1 >seq1389 Length=421085 Score = 78.8 bits (86), Expect = 1e-12 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 185 GACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 235 |||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct 241480 GACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACCGAAT 241530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796161962898