Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq76260 381 1e-103 seq890 376 4e-102 seq4985 282 7e-74 seq47448 161 2e-37 seq3180 152 9e-35 seq15201 78.8 2e-12 seq1463 73.4 7e-11 >seq76260 Length=12653 Score = 381 bits (422), Expect = 1e-103 Identities = 261/293 (89%), Gaps = 1/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| || | | || ||| ||||||||||||||||||||||||||||| Sbjct 3032 TACTAGGTTGAATTACTATCGCGACG-CGGGCATCAGTAGGGTAAAACTAACCTGTCTCA 3090 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 3091 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAGCCAACGCTTGGTGA 3150 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3151 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 3210 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || | Sbjct 3211 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCTT 3270 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 ||| | | | | |||||||||||||||||| |||||| ||| ||||||| Sbjct 3271 AAAACTCTTAAAGTCAAAAGGATCGATAGGCCACGCTTTCACGGTCTGTATTC 3323 >seq890 Length=1148126 Score = 376 bits (416), Expect = 4e-102 Identities = 252/280 (90%), Gaps = 1/280 (0%) Strand=Plus/Plus Query 15 ACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAAC 73 ||||||| ||||| ||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 880629 ACCATTGCAACGACGTGTCATCAGTAGGGTAAAACTAACCTCTCTCACGACGGTCTAAAC 880688 Query 74 CCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGT 133 |||||||||||||||||||||||||||||||| ||||||||| |||||||||||| Sbjct 880689 CCAGCTCACGTTCCCTATTAGTGGGTGAACAAGCCAACGCTTGGTGAATTCTGCTTCACA 880748 Query 134 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 880749 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 880808 Query 194 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGG 253 |||||||||||||||||||||||||||||||||| ||||||| || | ||| | | | Sbjct 880809 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCTTAAAACTCTTAAAG 880868 Query 254 ACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | |||||||||||||||||| |||||| ||| ||||||| Sbjct 880869 TCAAAAGGATCGATAGGCCACGCTTTCACGGTCTGTATTC 880908 >seq4985 Length=490927 Score = 282 bits (312), Expect = 7e-74 Identities = 238/294 (81%), Gaps = 30/294 (10%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | |||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 469473 TACTGAGCAGGATTACCATTGCAACGACGTGTCATCAGTAGGGTAAAACTAACCTGTCTC 469414 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct 469413 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAGCCAACGCTTGGTG 469354 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||| ||||||||| ||||||||||||||||||||||||| Sbjct 469353 AATTCTGCTTTACAATGATAGGA-----------GGAAGGATCAAAAAGCAACGTCGCTA 469305 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 469304 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTT-----AAACTCT---- 469254 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | || | | |||| ||||||||||||| ||||| ||| ||||||| Sbjct 469253 TAAA---------GTCAAAAGAATCGATAGGCCACGTTTTCACGGTCTGTATTC 469209 >seq47448 Length=367 Score = 161 bits (178), Expect = 2e-37 Identities = 97/102 (95%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 194 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGG 253 |||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||| Sbjct 1 CCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCCTGAAATTTCCAGGA 60 Query 254 ACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TCTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 102 >seq3180 Length=201633 Score = 152 bits (168), Expect = 9e-35 Identities = 113/132 (86%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 162 CAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACT 221 |||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 159271 CAAAAAGCAATGCTACTATGAACGCTTGGCTGCCACAAGCCAGTAATCCCTGTGGTAACT 159330 Query 222 TTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCA 281 |||||| ||||||| || | ||| | || | | |||||||||||||||||| |||||| Sbjct 159331 TTTCTGACACCTCTTGCTTAAAACTCTTAGAGTCAAAAGGATCGATAGGCCACGCTTTCA 159390 Query 282 TGGTTTGTATTC 293 ||| ||||||| Sbjct 159391 CGGTCTGTATTC 159402 Score = 77.0 bits (84), Expect = 6e-12 Identities = 60/72 (83%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 76 AGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTAT 135 ||||||| |||||||||||||||||||||| ||||||| |||||||||||| || Sbjct 158999 AGCTCACCTTCCCTATTAGTGGGTGAACAAGGGAACGCTTGGTGAATTCTGCTTCACAAT 159058 Query 136 GATAGGAAGAGC 147 ||||| || ||| Sbjct 159059 GATAGAAAAAGC 159070 >seq15201 Length=219 Score = 78.8 bits (86), Expect = 2e-12 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 201 CCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAG 260 ||||||||||||||||||||||||||| |||||| || | ||| | || | ||| Sbjct 219 CCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAG 160 Query 261 GATCGATAGGCCACACTTTCATGGTTTGTATTC 293 ||||| ||||| | |||||| ||| ||||||| Sbjct 159 GATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 127 >seq1463 Length=1178094 Score = 73.4 bits (80), Expect = 7e-11 Identities = 43/45 (96%), Gaps = 0/45 (0%) Strand=Plus/Minus Query 173 GTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGT 217 ||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct 700887 GTCGCTATGAACGCTTGACTGGCACAAGCCAGTTATCCCTGTGGT 700843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853693770048