Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq76060 95.1 7e-18 seq4902 95.1 7e-18 seq2466 95.1 7e-18 seq1046 95.1 7e-18 seq890 95.1 7e-18 seq3345 77.0 2e-12 >seq76060 Length=5805 Score = 95.1 bits (104), Expect = 7e-18 Identities = 69/76 (91%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 199 CTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 142 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 141 TAAT-CAACGCGAGCT 127 >seq4902 Length=494613 Score = 95.1 bits (104), Expect = 7e-18 Identities = 69/76 (91%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 479291 CTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 479348 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 479349 TAAT-CAACGCGAGCT 479363 >seq2466 Length=405557 Score = 95.1 bits (104), Expect = 7e-18 Identities = 69/76 (91%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 205941 CTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 205998 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 205999 TAAT-CAACGCGAGCT 206013 >seq1046 Length=1918858 Score = 95.1 bits (104), Expect = 7e-18 Identities = 69/76 (91%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 11860 CTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 11803 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 11802 TAAT-CAACGCGAGCT 11788 >seq890 Length=1148126 Score = 95.1 bits (104), Expect = 7e-18 Identities = 69/76 (91%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| ||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 876956 CTCACTAAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 877013 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 877014 TAAT-CAACGCGAGCT 877028 >seq3345 Length=2905891 Score = 77.0 bits (84), Expect = 2e-12 Identities = 55/61 (90%), Gaps = 2/61 (3%) Strand=Plus/Minus Query 64 CATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGC 123 || |||||| ||||||||||||| |||||||||||||||||||||||| |||||| ||| Sbjct 1225418 CAATCGGTAA-AAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGC 1225361 Query 124 T 124 | Sbjct 1225360 T 1225360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300566904440