Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq38889 158 1e-36 seq4902 96.9 4e-18 seq2466 96.9 4e-18 seq1046 96.9 4e-18 seq890 96.9 4e-18 >seq38889 Length=305 Score = 158 bits (174), Expect = 1e-36 Identities = 120/138 (87%), Gaps = 3/138 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| || | |||||||||||||||||||||||||||||||| Sbjct 172 CTAGAAACCAACAAAATAGA-ACCAAAGTCCTATTCTATTATTCCATGCTAATGTATTCA 114 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || |||||||||||| |||||||||||||| |||| ||||||||||| | ||| | | | Sbjct 113 AGCATAAGCCTGCTTTAAACACTCTAATTTTTTCAAAGTAAAAGTCCTAGATCCCCAGTA 54 Query 126 CAC-CAATGAAG-GCATA 141 ||| |||||||| ||||| Sbjct 53 CACACAATGAAGTGCATA 36 >seq4902 Length=494613 Score = 96.9 bits (106), Expect = 4e-18 Identities = 84/102 (82%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| |||||||||||| ||||| |||| Sbjct 480125 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACCATTATTCAGGCG 480183 Query 70 TAA-GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | |||||||||||||||||||||||| |||| ||||| || Sbjct 480184 AATTGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAATGT 480225 >seq2466 Length=405557 Score = 96.9 bits (106), Expect = 4e-18 Identities = 84/102 (82%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| |||||||||||| ||||| |||| Sbjct 206775 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACCATTATTCAGGCG 206833 Query 70 TAA-GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | |||||||||||||||||||||||| |||| ||||| || Sbjct 206834 AATTGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAATGT 206875 >seq1046 Length=1918858 Score = 96.9 bits (106), Expect = 4e-18 Identities = 84/102 (82%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| |||||||||||| ||||| |||| Sbjct 11026 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACCATTATTCAGGCG 10968 Query 70 TAA-GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | |||||||||||||||||||||||| |||| ||||| || Sbjct 10967 AATTGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAATGT 10926 >seq890 Length=1148126 Score = 96.9 bits (106), Expect = 4e-18 Identities = 84/102 (82%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| |||||||||||| ||||| |||| Sbjct 877790 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACCATTATTCAGGCG 877848 Query 70 TAA-GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | |||||||||||||||||||||||| |||| ||||| || Sbjct 877849 AATTGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAATGT 877890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594723393972