Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq38889 228 8e-58 seq4902 129 6e-28 seq2466 129 6e-28 seq1046 129 6e-28 seq890 129 6e-28 >seq38889 Length=305 Score = 228 bits (252), Expect = 8e-58 Identities = 166/190 (87%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||| | ||||||||||||||||||||||||||| ||| ||||||||| | |||| ||||| Sbjct 60 GGATCTAGGACTTTTACTTTGAAAAAATTAGAGTGTTTAAAGCAGGCTTATGCTTGAATA 119 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| ||||||||||||||||||||| | ||||||||||||| |||||||||||||| Sbjct 120 CATTAGCATGGAATAATAGAATAGGAC-TTTGGTTCTATTTTGTTGGTTTCTAGGACCG- 177 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||| |||| ||||||| ||||| | |||||| |||||||| ||||||||||| Sbjct 178 AAGTAATGATTAATAGGGATAGTTGGGGGCATTAGTATTTAATTGTCAGAGGTGAAATTC 237 Query 181 TTGGATTTAT 190 || ||||||| Sbjct 238 TTAGATTTAT 247 >seq4902 Length=494613 Score = 129 bits (142), Expect = 6e-28 Identities = 137/178 (77%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTCGAATACATTACCA 68 || ||||||||||||||||||||| ||||||||||||| || || ||||| || Sbjct 480225 ACATTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCAATTCGCCTGAATAATGGTGCA 480166 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATG 128 ||||||||| ||||||||| | |||||||||||||| ||||| | || |||||| Sbjct 480165 TGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTTTCGGAACTTGAGGTAATG 480107 Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 || || | ||| || |||||| | ||||| ||| | ||||||||||||||||| Sbjct 480106 ATTAAGAGGGACAGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGAT 480049 >seq2466 Length=405557 Score = 129 bits (142), Expect = 6e-28 Identities = 137/178 (77%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTCGAATACATTACCA 68 || ||||||||||||||||||||| ||||||||||||| || || ||||| || Sbjct 206875 ACATTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCAATTCGCCTGAATAATGGTGCA 206816 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATG 128 ||||||||| ||||||||| | |||||||||||||| ||||| | || |||||| Sbjct 206815 TGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTTTCGGAACTTGAGGTAATG 206757 Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 || || | ||| || |||||| | ||||| ||| | ||||||||||||||||| Sbjct 206756 ATTAAGAGGGACAGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGAT 206699 >seq1046 Length=1918858 Score = 129 bits (142), Expect = 6e-28 Identities = 137/178 (77%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTCGAATACATTACCA 68 || ||||||||||||||||||||| ||||||||||||| || || ||||| || Sbjct 10926 ACATTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCAATTCGCCTGAATAATGGTGCA 10985 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATG 128 ||||||||| ||||||||| | |||||||||||||| ||||| | || |||||| Sbjct 10986 TGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTTTCGGAACTTGAGGTAATG 11044 Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 || || | ||| || |||||| | ||||| ||| | ||||||||||||||||| Sbjct 11045 ATTAAGAGGGACAGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGAT 11102 >seq890 Length=1148126 Score = 129 bits (142), Expect = 6e-28 Identities = 137/178 (77%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTCGAATACATTACCA 68 || ||||||||||||||||||||| ||||||||||||| || || ||||| || Sbjct 877890 ACATTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCAATTCGCCTGAATAATGGTGCA 877831 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATG 128 ||||||||| ||||||||| | |||||||||||||| ||||| | || |||||| Sbjct 877830 TGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTTTCGGAACTTGAGGTAATG 877772 Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 || || | ||| || |||||| | ||||| ||| | ||||||||||||||||| Sbjct 877771 ATTAAGAGGGACAGACGGGGGCATTCGTATTACGGTGTTAGAGGTGAAATTCTTGGAT 877714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511590016320