Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq76260 589 7e-166 seq890 410 4e-112 seq4985 340 6e-91 seq47448 273 7e-71 seq5588 163 9e-38 seq3642 107 6e-21 seq15201 100 9e-19 seq4118 95.1 4e-17 seq5416 86.0 2e-14 seq73144 80.6 9e-13 >seq76260 Length=12653 Score = 589 bits (652), Expect = 7e-166 Identities = 457/540 (85%), Gaps = 13/540 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| |||||| ||| |||| || ||| |||| | ||||||||||||||||||| Sbjct 3357 CTTTTACTCTACGCGAGGTTTCCGTCCTCGCTGAGCTCACCTTAGGACACCTGCGTTACC 3416 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| ||||||| |||| ||| ||||| Sbjct 3417 TTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACACTGTCTTCAGAGAGGATC 3476 Query 127 GGCCC--GCGA-AGGAC-----CTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTC--C 176 | | ||| ||| | ||||| |||||| | | | | || | || | Sbjct 3477 ACCACCGGCGCGAGGCCGGTGACTTAATTCCAGAATCGAGGAGCTTGCGCCCCGCTCTCC 3536 Query 177 GCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGG 236 |||| | ||| |||||||| ||||||||| |||||||||||||| || || || Sbjct 3537 GCTTTACTGAATAAGTAAAGAAACGATAAAAGTAGTGGTATTTCAATTTCGTTTGCAC-- 3594 Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||| ||| ||||||| ||| ||| |||||||||||||||||||||||||||||| Sbjct 3595 -TCCCACCTATGCTACACCCTTCATGTCTCTTCACAAAGTCGGACTAGAGTCAAGCTCAA 3653 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 3654 CAGGGTCTTCTTTCCCCGCTGATGTTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 3713 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3714 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 3773 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3774 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGA 3833 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCA 536 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 3834 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCA 3893 Score = 493 bits (546), Expect = 4e-137 Identities = 357/407 (88%), Gaps = 7/407 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 10425 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 10484 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 10485 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCCTCCGCCCGGATC 10544 Query 127 GGCCCGC-GAAG-GA-CCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCAT 183 | ||||| |||| || |||| ||| ||| || | || | || |||| |||| Sbjct 10545 GACCCGCCGAAGCGAGCCTTGGGACCAAAAACAGGG-GTTGTACCCCGCCTCCGATTCAC 10603 Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCAC 243 || ||||||||| |||| ||| ||||||||||||||||||||||||| |||||||| Sbjct 10604 GGAGTAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTGCGCCGAA---GCTCCCAC 10660 Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10661 TTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 10720 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 |||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||| Sbjct 10721 TTCTTTCCCCGCTGATGCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAG 10780 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAAT 410 | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10781 ACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAAT 10827 Score = 477 bits (528), Expect = 3e-132 Identities = 284/297 (96%), Gaps = 0/297 (0%) Strand=Plus/Plus Query 240 CCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAG 299 ||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||||| Sbjct 1 CCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAACAG 60 Query 300 GGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 61 GGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATA 120 Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 121 GTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATGACG 180 Query 420 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 181 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGATTG 240 Query 480 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCA 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 241 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCA 297 >seq890 Length=1148126 Score = 410 bits (454), Expect = 4e-112 Identities = 355/436 (81%), Gaps = 13/436 (3%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| |||||| ||| |||| || ||| |||| | ||||||||||||||||||| Sbjct 880942 CTTTTACTCTACGCGAGGTTTCCGTCCTCGCTGAGCTCACCTTAGGACACCTGCGTTACC 881001 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| ||||||| |||| ||| ||||| Sbjct 881002 TTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACACTGTCTTCAGAGAGGATC 881061 Query 127 GGCCC--GCGA-AGGAC-----CTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTC--C 176 | | ||| ||| | ||||| |||||| | | | | || | || | Sbjct 881062 ACCACCGGCGCGAGGCCGGTGACTTAATTCCAGAATCGAGGAGCTTGCGCCCCGCTCTCC 881121 Query 177 GCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGG 236 |||| | ||| |||||||| ||||||||| |||||||||||||| || || || Sbjct 881122 GCTTTACTGAATAAGTAAAGAAACGATAAAAGTAGTGGTATTTCAATTTCGTTTGCAC-- 881179 Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||| ||| ||||||| ||| ||| |||||||||||||||||||||||||||||| Sbjct 881180 -TCCCACCTATGCTACACCCTTCATGTCTCTTCACAAAGTCGGACTAGAGTCAAGCTCAA 881238 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 881239 CAGGGTCTTCTTTCCCCGCTGATGTTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 881298 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 881299 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 881358 Query 417 ACGAGGCATTTGGCTA 432 |||||||||||||||| Sbjct 881359 ACGAGGCATTTGGCTA 881374 >seq4985 Length=490927 Score = 340 bits (376), Expect = 6e-91 Identities = 348/451 (77%), Gaps = 19/451 (4%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| |||||| ||| |||| || ||| |||| | || |||||||||||||||| Sbjct 469175 CTTTTACTCTACGCGAGGTTTCCGTCCTCGCTGAGCTCACCATAGGACACCTGCGTTACC 469116 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| ||||||| |||| ||| ||||| Sbjct 469115 TTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACACTGTCTTCAGAGAGGATC 469056 Query 127 GGCCC----GCGAAGGAC----CTTAACGCCAGAAAATGGTCGGTGAAGACCAGT-TCCG 177 | | |||| | ||||| ||||| | | | | | || | |||| Sbjct 469055 ACCACCGGCGCGAGGCTGGTTACTTAATTTCAGAATCGAGGAGCTTACGCCCGCTCTCCG 468996 Query 178 CTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGC 237 ||| | ||| |||||||| ||||||||| ||||||||||| || || | || Sbjct 468995 CTTTACTGAATAAGTAAAGAAACGATAAAAGTAGTGGTATTACAATTTCTTTTGCAC--- 468939 Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT---- 293 |||||| ||| ||||||| ||| ||| ||||||||||||||||||||| ||||| Sbjct 468938 TCCCACCTATGCTACACCCTTCATGTCTCTTCACAAAGTCGGACTAGAGTAAAGCTGTTA 468879 Query 294 -CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 468878 ACAACAGGGACTTCTTTCCCCGCTGATGTTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 468819 Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412 | |||| ||||||||| ||||| | | ||||||||||||||||||||||||||||||| Sbjct 468818 CGGGATATTAGATAGGGCCAGTGAAACTATCGTTAATCCATTCATGCGCGTCACTAATTA 468759 Query 413 GATGACGAGGCATTTGGCTACCTTAAGAGAG 443 |||||||||||||||||||| |||||| || Sbjct 468758 GATGACGAGGCATTTGGCTA--TTAAGACAG 468730 Score = 147 bits (162), Expect = 7e-33 Identities = 89/94 (95%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 443 GTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAG 502 |||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct 468523 GTCAAAGTTACTCCCGCCGTTTACCCGCGCTTGATTGAATTTCTTTACTTTGACATTCAA 468464 Query 503 AGCACTGGGCAGAAATCACATTGCGTCAACATCA 536 ||||||||||||||||||||||||||||||| || Sbjct 468463 AGCACTGGGCAGAAATCACATTGCGTCAACACCA 468430 >seq47448 Length=367 Score = 273 bits (302), Expect = 7e-71 Identities = 203/237 (86%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 134 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTTCCCCTTAGGACACCTGCGTTATT 193 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||||||||||||||||||||||||||||||||||||| |||| | ||||| Sbjct 194 TTTTTACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAAACTGGATC 253 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 | || ||| |||||||||| ||||| ||| | |||||| ||| |||| | | ||||| Sbjct 254 AGTTCGTAAAGAACCTTAACGCTAGAAAGTGGACCGTGAAGTCCAATTCCACATTATTGA 313 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCAC 243 ||||||||||||| |||| ||||||||||||||| ||||||| |||||||| Sbjct 314 ATAAGTAAAAAAACAATAAAGGTAGTGGTATTTCAAGATCGCCGAA---GCTCCCAC 367 >seq5588 Length=1563652 Score = 163 bits (180), Expect = 9e-38 Identities = 96/100 (96%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 |||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||| Sbjct 1553259 AAGAGAGTCATAGTTACTCCCGCCGTTTACTCGCGCTTGATTGAATTTCTGCACTTTGAC 1553318 Query 497 ATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCA 536 ||||||||||||||||||||||||||||||||||||| || Sbjct 1553319 ATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCA 1553358 >seq3642 Length=239063 Score = 107 bits (118), Expect = 6e-21 Identities = 80/94 (85%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 ||| |||||||| ||||||||||| |||||| | ||||| || ||||||||||| | | Sbjct 63593 TTAGGAGAGTCAAAGTTACTCCCGATGTTTACTTGTGCTTGATTAAATTTCTTCACATCG 63652 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGT 528 |||||||||||||||||||||||| ||||| || Sbjct 63653 ACATTCAGAGCACTGGGCAGAAATTTCATTGAGT 63686 >seq15201 Length=219 Score = 100 bits (110), Expect = 9e-19 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 93 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 34 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCC 99 |||| |||| ||| ||||||||| ||||||||| Sbjct 33 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCC 1 >seq4118 Length=890497 Score = 95.1 bits (104), Expect = 4e-17 Identities = 54/55 (98%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAA 409 |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 312754 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCTATTCATGCGCGTCACTAA 312700 >seq5416 Length=1154231 Score = 86.0 bits (94), Expect = 2e-14 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 |||||| || ||||||||||||||||||| |||||| |||||||||||||||| ||| | Sbjct 50432 AGGGACCGTTGGAATCTCGTTAATCCATTTATGCGCTTCACTAATTAGATGACAAGGTGT 50491 Query 426 TTGGCTA 432 |||||| Sbjct 50492 CTGGCTA 50498 >seq73144 Length=1156 Score = 80.6 bits (88), Expect = 9e-13 Identities = 44/44 (100%), Gaps = 0/44 (0%) Strand=Plus/Minus Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 44 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1633848376384