Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq76134 455 1e-125 seq4902 453 3e-125 seq1046 453 3e-125 seq890 453 3e-125 seq1925 98.7 3e-18 >seq76134 Length=7358 Score = 455 bits (504), Expect = 1e-125 Identities = 312/348 (90%), Gaps = 13/348 (4%) Strand=Plus/Minus Query 106 GATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCC 165 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 7358 GATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTTACCC 7299 Query 166 GTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAAT 225 ||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 7298 GTTAAAACCATGGTAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAAT 7239 Query 226 GAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAA------ 279 ||||||||| || | || | ||| ||||||| |||||||||||||||||||| Sbjct 7238 GAACCATCGTCGACGTAAAGTCATACGATTCGAAAAGTTATTATGAATCACCAAAAAACT 7179 Query 280 GGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGT 338 || ||| || ||||||||||||||||||||||||| ||||||| ||||||||| | Sbjct 7178 GGTTGCCC--AG---GTTGGTTTTTTATCTAATAAATACAACCCTTCCAGAAGTCGGGTT 7124 Query 339 TTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAA-GGTACTATCAA 397 ||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct 7123 TTTACGCATGTATTAGCTCTAGAATTACCACGGTTATCCAAGTAGTAATGGTACTATCAA 7064 Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGA 445 |||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct 7063 ATAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTATAGA 7016 Score = 168 bits (186), Expect = 2e-39 Identities = 105/113 (93%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| | ||||||||| |||| |||||||||||||||||| Sbjct 113 GTACTCATTCCAATTACCAGACTCGAAAGAGCCCGGTATTGTTATTTATTGTCACTACCT 54 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGT 113 ||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 53 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGT 1 >seq4902 Length=494613 Score = 453 bits (502), Expect = 3e-125 Identities = 412/512 (80%), Gaps = 9/512 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||||||||| | || | |||||| || |||| ||||| | ||||||||| Sbjct 480449 GTACTCATTCCAATTACGGGGCCTCGAAAGAGTCCCGTATTGTTATTTTTCGTCACTACC 480508 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 480509 TCCCCGTGCCAGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 480568 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||| ||||||||||||||| |||||||| |||| |||||||||||| |||||||| Sbjct 480569 TTCTCATGCTCCCTCTCCGGAACCGAACCCTGATTCTCCGTTACCCGTTACAACCATGGT 480628 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | |||||||||||||||||||| |||| ||||||| || | |||||||| Sbjct 480629 AGGCATAGCACGTACCATCGAAAGTTGATAGGTCAGACATTTGAAAGATACGTCGCCGGC 480688 Query 240 TC-AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA---GGAGCCCCGAAGGG 293 || | |||| |||||| | ||||||| || ||||||| | | || | Sbjct 480689 TCGAGGGCCGTGCGATCAGCACAAAGTTATCCAGATTCACCAAATTGACGGCCTTGCGAC 480748 Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGG-GGTTTTTAGCATGTATT 352 || | | |||| | || ||||| | | ||| | |||||| | |||| ||||||||| Sbjct 480749 CGATTGGTTTTGAACTGATAAAATCGCACCTCCGTGAGTCGGTGCCTTTTTGCATGTATT 480808 Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412 |||||||||||| |||| |||||||| |||| | |||| ||| || ||| |||||||| Sbjct 480809 AGCTCTAGAATTGCCACAGTTATCCAAGTAGGATCGTACGATCTAAGGAACCATAACTGA 480868 Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTT 472 ||||||||||||||||| ||||||| | | | | | |||||||||||||||||||| Sbjct 480869 TTTAATGAGCCATTCGCGGTTTCACCAT-CAAAAAGTATGTACTTAGACATGCATGGCTT 480927 Query 473 AATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||| Sbjct 480928 AATCTTTGAGACAAGCATATGACTACTGGCAG 480959 >seq1046 Length=1918858 Score = 453 bits (502), Expect = 3e-125 Identities = 412/512 (80%), Gaps = 9/512 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||||||||| | || | |||||| || |||| ||||| | ||||||||| Sbjct 10702 GTACTCATTCCAATTACGGGGCCTCGAAAGAGTCCCGTATTGTTATTTTTCGTCACTACC 10643 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10642 TCCCCGTGCCAGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 10583 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||| ||||||||||||||| |||||||| |||| |||||||||||| |||||||| Sbjct 10582 TTCTCATGCTCCCTCTCCGGAACCGAACCCTGATTCTCCGTTACCCGTTACAACCATGGT 10523 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | |||||||||||||||||||| |||| ||||||| || | |||||||| Sbjct 10522 AGGCATAGCACGTACCATCGAAAGTTGATAGGTCAGACATTTGAAAGATACGTCGCCGGC 10463 Query 240 TC-AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA---GGAGCCCCGAAGGG 293 || | |||| |||||| | ||||||| || ||||||| | | || | Sbjct 10462 TCGAGGGCCGTGCGATCAGCACAAAGTTATCCAGATTCACCAAATTGACGGCCTTGCGAC 10403 Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGG-GGTTTTTAGCATGTATT 352 || | | |||| | || ||||| | | ||| | |||||| | |||| ||||||||| Sbjct 10402 CGATTGGTTTTGAACTGATAAAATCGCACCTCCGTGAGTCGGTGCCTTTTTGCATGTATT 10343 Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412 |||||||||||| |||| |||||||| |||| | |||| ||| || ||| |||||||| Sbjct 10342 AGCTCTAGAATTGCCACAGTTATCCAAGTAGGATCGTACGATCTAAGGAACCATAACTGA 10283 Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTT 472 ||||||||||||||||| ||||||| | | | | | |||||||||||||||||||| Sbjct 10282 TTTAATGAGCCATTCGCGGTTTCACCAT-CAAAAAGTATGTACTTAGACATGCATGGCTT 10224 Query 473 AATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||| Sbjct 10223 AATCTTTGAGACAAGCATATGACTACTGGCAG 10192 >seq890 Length=1148126 Score = 453 bits (502), Expect = 3e-125 Identities = 412/512 (80%), Gaps = 9/512 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||||||||| | || | |||||| || |||| ||||| | ||||||||| Sbjct 878114 GTACTCATTCCAATTACGGGGCCTCGAAAGAGTCCCGTATTGTTATTTTTCGTCACTACC 878173 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 878174 TCCCCGTGCCAGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 878233 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||| ||||||||||||||| |||||||| |||| |||||||||||| |||||||| Sbjct 878234 TTCTCATGCTCCCTCTCCGGAACCGAACCCTGATTCTCCGTTACCCGTTACAACCATGGT 878293 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | |||||||||||||||||||| |||| ||||||| || | |||||||| Sbjct 878294 AGGCATAGCACGTACCATCGAAAGTTGATAGGTCAGACATTTGAAAGATACGTCGCCGGC 878353 Query 240 TC-AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA---GGAGCCCCGAAGGG 293 || | |||| |||||| | ||||||| || ||||||| | | || | Sbjct 878354 TCGAGGGCCGTGCGATCAGCACAAAGTTATCCAGATTCACCAAATTGACGGCCTTGCGAC 878413 Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGG-GGTTTTTAGCATGTATT 352 || | | |||| | || ||||| | | ||| | |||||| | |||| ||||||||| Sbjct 878414 CGATTGGTTTTGAACTGATAAAATCGCACCTCCGTGAGTCGGTGCCTTTTTGCATGTATT 878473 Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412 |||||||||||| |||| |||||||| |||| | |||| ||| || ||| |||||||| Sbjct 878474 AGCTCTAGAATTGCCACAGTTATCCAAGTAGGATCGTACGATCTAAGGAACCATAACTGA 878533 Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTT 472 ||||||||||||||||| ||||||| | | | | | |||||||||||||||||||| Sbjct 878534 TTTAATGAGCCATTCGCGGTTTCACCAT-CAAAAAGTATGTACTTAGACATGCATGGCTT 878592 Query 473 AATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||| Sbjct 878593 AATCTTTGAGACAAGCATATGACTACTGGCAG 878624 >seq1925 Length=1383459 Score = 98.7 bits (108), Expect = 3e-18 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 339 TTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAA 398 |||| ||||||||||| ||||||||| |||| |||||| | | || | ||| ||| || Sbjct 736053 TTTTTGCATGTATTAGTTCTAGAATTGCCACAGTTATCAAAGCAGGATCGTATGATCTAA 736112 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCAC 437 ||| ||||||||||||||||| ||||||| ||||||| Sbjct 736113 GGAACCATAACTGATTTAATGAGGCATTCGCGGTTTCAC 736151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509151533568