Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mnemiopsis_20leidyi_20[genbank_20GCA_5F000226015.1_202011-09-19] 5,100 sequences; 155,865,547 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1223 167 4e-39 >seq1223 Length=156115 Score = 167 bits (184), Expect = 4e-39 Identities = 124/141 (88%), Gaps = 3/141 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| | |||| ||||||||||| |||||||||||| ||| Sbjct 911 GTACAAAGGGCAGGGACGTAATCAGCACGAG-TTGATGACTCGTGCTTACTAGGAA-TTC 968 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| |||||||| |||||||||| |||||||||| ||||||||| ||||| |||||| Sbjct 969 CTCGTTCAAGACCAATAATTGCAATGGTCTATCCCCAGCACGATGAAGTTTCACAAGATT 1028 Query 120 ACCCGGACCTGTCGGCCAAGG 140 ||||| |||| ||| |||| Sbjct 1029 ACCCGCACCTTCCGGTGAAGG 1049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751962846500