Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mnemiopsis_20leidyi_20[genbank_20GCA_5F000226015.1_202011-09-19] 5,100 sequences; 155,865,547 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1223 168 1e-39 >seq1223 Length=156115 Score = 168 bits (186), Expect = 1e-39 Identities = 120/138 (87%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||| ||||||||| |||||||||||| ||||| |||||||||||||||| ||||| Sbjct 1049 CCTTCACCGGAAGGTGCGGGTAATCTTGTGAAACTTCATCGTGCTGGGGATAGACCATTG 990 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||||||| |||| |||||||||| |||||||||| || ||||||| | || | ||||| Sbjct 989 CAATTATTGGTCTTGAACGAGGAATTCCTAGTAAGCACGAGTCATCAACTCGTGCTGATT 930 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 929 ACGTCCCTGCCCTTTGTA 912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947151692800